RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ARF3P61204 181 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 MAP7Q14244 749 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 SLBPQ14493 270 aaKnown RBP eCLIP10.26□□□□□ -0.77
TPM1-229ENST00000561242 HERC3Q15034 1050 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ARHGAP40Q5TG30 622 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 HHATQ5VTY9 493 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 IRAK1BP1Q5VVH5 260 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 LIPJQ5W064 366 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ATG9BQ674R7 924 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PWWP2BQ6NUJ5 590 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 XKR5Q6UX68 686 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 TMIGD1Q6UXZ0 262 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ZFAND4Q86XD8 727 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 MFSD9Q8NBP5 474 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 OR1L3Q8NH93 324 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ISL2Q96A47 359 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PTERQ96BW5 349 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ZNF501Q96CX3 271 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 MMABQ96EY8 250 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 SEC16BQ96JE7 1060 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PPM1MQ96MI6 270 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 CCNL2Q96S94 520 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 ARHGAP9Q9BRR9 750 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 TMEM109Q9BVC6 243 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 GPR87Q9BY21 358 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 ELOVL6Q9H5J4 265 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 IPPKQ9H8X2 491 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 APMAPQ9HDC9 416 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 RRAGDQ9NQL2 400 aaPredicted RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 DKK4Q9UBT3 224 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 SNX6Q9UNH7 406 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 DOCK9Q9BZ29 2069 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 A0A1B0GX78 115 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 A0A1W2PPM1 405 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 FEZF1A0PJY2 475 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 OR2A25A4D2G3 310 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 KRT87PA6NCN2 255 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 CDRT15L2A8MXV6 281 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 C21orf140B9A014 251 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 C9orf172C9J069 976 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 MEN1O00255 615 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 CLDN9O95484 217 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 IGHEP01854 428 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 C1QAP02745 245 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 FBLP22087 321 aaKnown RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 PEBP1P30086 187 aaKnown RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 AHRP35869 848 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 TMPRSS3P57727 454 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 PWP1Q13610 501 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 CASP8Q14790 479 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 NAA30Q147X3 362 aaPredicted RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 PCBP2Q15366 365 aaKnown RBP eCLIP10.25□□□□□ -0.77
TPM1-229ENST00000561242 PPP1R3AQ16821 1122 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ST3GAL2Q16842 350 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 TECRLQ5HYJ1 363 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 C10orf62Q5T681 223 aaPredicted RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 C1orf189Q5VU69 101 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 TRIM40Q6P9F5 258 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 PAQR7Q86WK9 346 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 TRIM42Q8IWZ5 723 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 KIRREL3Q8IZU9 778 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 CENPLQ8N0S6 344 aaPredicted RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ABHD11Q8NFV4 315 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 DYDC1Q8WWB3 177 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 NEIL2Q969S2 332 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 APOPT1Q96IL0 206 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ZIM3Q96PE6 472 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ATOH8Q96SQ7 321 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 MENTQ9BUN1 341 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 EHD1Q9H4M9 534 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ZNF304Q9HCX3 659 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 SLC6A20Q9NP91 592 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 LHX9Q9NQ69 397 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 LGALS13Q9UHV8 139 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ZFP69BQ9UJL9 534 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 NXT1Q9UKK6 140 aaKnown RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 FARSAQ9Y285 508 aaKnown RBP10.25□□□□□ -0.77
TPM1-229ENST00000561242 TMEM131Q92545 1883 aa10.25□□□□□ -0.77
TPM1-229ENST00000561242 ASCC3Q8N3C0 2202 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 KCNE1BA0A087WTH5 132 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 A0A1W2PPV9 198 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 HMX2A2RU54 273 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 ZNF891A8MT65 544 aaPredicted RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 HAT1O14929 419 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 DSCR3O14972 297 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 CASC3O15234 703 aaKnown RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 PRICKLE3O43900 615 aaPredicted RBP10.24□□□□□ -0.77
TPM1-229ENST00000561242 UGDHO60701 494 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 SPAG7O75391 227 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 ZWINTO95229 277 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 KRT6AP02538 564 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 KRT6BP04259 564 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 IMPDH1P20839 514 aa10.24□□□□□ -0.77
TPM1-229ENST00000561242 FOLR3P41439 243 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms