RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	SHARPIN	Q9H0F6	387 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	MINDY3	Q9H8M7	445 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	LMAN1L	Q9HAT1	526 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	TRPV4	Q9HBA0	871 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	SIX2	Q9NPC8	291 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	ADPRHL2	Q9NX46	363 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	ERAP1	Q9NZ08	941 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	TNN	Q9UQP3	1299 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	RALGAPB	Q86X10	1494 aa		4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	SPAG9	O60271	1321 aa	Known RBP	4.91	□□□□□ -1.62
TCF12-223	ENST00000561235	PREX2	Q70Z35	1606 aa		4.9	□□□□□ -1.62
TCF12-223	ENST00000561235	SMIM1	B2RUZ4	78 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	PI4K2B	G5E9Z4	385 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	SELENOF	O60613	162 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	FCGR3B	O75015	233 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	LUC7L3	O95232	432 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	PGLS	O95336	258 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	SERPING1	P05155	500 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	STAG3L1	P0CL83	205 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	SP100	P23497	879 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	ALDH1B1	P30837	517 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	TIA1	P31483	386 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	CSTF2	P33240	577 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	TIMP3	P35625	211 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	ALDH3A2	P51648	485 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	YWHAH	Q04917	246 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	KLC1	Q07866	573 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	P2RY6	Q15077	328 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	FAM174B	Q3ZCQ3	159 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	TXNRD3NB	Q6F5E7	133 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	SLC35E4	Q6ICL7	350 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	OR4A47	Q6IF82	309 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	CYB5D1	Q6P9G0	228 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	CEACAM20	Q6UY09	585 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	GET4	Q7L5D6	327 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	CREBRF	Q8IUR6	639 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	UXS1	Q8NBZ7	420 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	OR10V1	Q8NGI7	309 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	DNASE1L2	Q92874	299 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	RIT1	Q92963	219 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	PYCR2	Q96C36	320 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	INTS9	Q9NV88	658 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	MROH1	Q8NDA8	1641 aa		4.9	□□□□□ -1.63
TCF12-223	ENST00000561235	TET3	O43151	1660 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	CAMSAP2	Q08AD1	1489 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	UTRN	P46939	3433 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	IGHV4-61	A0A0C4DH41	118 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235		A0A0U1RQK1	487 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	ZNF320	A2RRD8	509 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	PRSS44	E7EML9	344 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	IGHV4-59	P01825	116 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	RLN1	P04808	185 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	UMOD	P07911	640 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	CA6	P23280	308 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	KRT2	P35908	639 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	CCDC92	Q53HC0	331 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	SLC35D3	Q5M8T2	416 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	C20orf194	Q5TEA3	1177 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	MEX3B	Q6ZN04	569 aa	Known RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	SLC16A9	Q7RTY1	509 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	PIGZ	Q86VD9	579 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	HOOK3	Q86VS8	718 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	ZSCAN30	Q86W11	494 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	NDUFAF2	Q8N183	169 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	NOA1	Q8NC60	698 aa	Known RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	OR4C3	Q8NH37	302 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	UHRF2	Q96PU4	802 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	PARK7	Q99497	189 aa	Known RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	MLPH	Q9BV36	600 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	SLC52A3	Q9NQ40	469 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	SEPT10	Q9P0V9	454 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	ITGA11	Q9UKX5	1188 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	KCNJ14	Q9UNX9	436 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	GLI3	P10071	1580 aa		4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-223	ENST00000561235	PRX	Q9BXM0	1461 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ASXL1	Q8IXJ9	1541 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	EME2	A4GXA9	379 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	IFIT3	O14879	490 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	PLG	P00747	810 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ANKRD34C	P0C6C1	535 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ATP5D	P30049	168 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	CDR2	Q01850	454 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	MEP1B	Q16820	701 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	CDO1	Q16878	200 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	NOTUM	Q6P988	496 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ZNF449	Q6P9G9	518 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	BTNL8	Q6UX41	500 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	SH2D5	Q6ZV89	423 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	IQCA1	Q86XH1	822 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	DCUN1D3	Q8IWE4	304 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	ATAD1	Q8NBU5	361 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	MAP3K3	Q99759	626 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	PIGQ	Q9BRB3	760 aa		4.88	□□□□□ -1.63
TCF12-223	ENST00000561235	PANK2	Q9BZ23	570 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms