RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 THEMIS2Q5TEJ8 643 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 C8orf74Q6P047 294 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 PLD3Q8IV08 490 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 CSNK1A1LQ8N752 337 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 GPATCH11Q8N954 259 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 KIF18AQ8NI77 898 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 PNPLA2Q96AD5 504 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 FAM129AQ9BZQ8 928 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 PARVBQ9HBI1 364 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 MOCS1Q9NZB8 636 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 NXT1Q9UKK6 140 aaKnown RBP15.2■□□□□ 0.02
LMX1B-204ENST00000561065 CSAG2Q9Y5P2 127 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 UTP20O75691 2785 aaKnown RBP15.2■□□□□ 0.02
LMX1B-204ENST00000561065 SPTAN1Q13813 2472 aaKnown RBP15.2■□□□□ 0.02
LMX1B-204ENST00000561065 RP1L1Q8IWN7 2480 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-204ENST00000561065 HIVEP3Q5T1R4 2406 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 IGLV3-12A0A075B6K2 115 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 TXNDC9O14530 226 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 STATHP02808 62 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 KLC1Q07866 573 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 Q0VFX4 171 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 INPP5JQ15735 1006 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-204ENST00000561065 MUM1Q2TAK8 710 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 TRMT10BQ6PF06 316 aaKnown RBP15.19■□□□□ 0.02
LMX1B-204ENST00000561065 C3orf62Q6ZUJ4 267 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 ATCAYQ86WG3 371 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 HPS6Q86YV9 775 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 PRSS58Q8IYP2 241 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 SHISA5Q8N114 240 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 NKAPQ8N5F7 415 aaKnown RBP15.19■□□□□ 0.02
LMX1B-204ENST00000561065 AMER3Q8N944 861 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 OR11G2Q8NGC1 345 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 STT3BQ8TCJ2 826 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 EEF1AKMT1Q8WVE0 214 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 ATL1Q8WXF7 558 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 CABS1Q96KC9 395 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 ZNF304Q9HCX3 659 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 SAYSD1Q9NPB0 183 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 C5AR2Q9P296 337 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 G3BP2Q9UN86 482 aaKnown RBP15.19■□□□□ 0.02
LMX1B-204ENST00000561065 PDE10AQ9Y233 779 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 MRPS2Q9Y399 296 aaKnown RBP15.19■□□□□ 0.02
LMX1B-204ENST00000561065 MAST4O15021 2626 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 CPAMD8Q8IZJ3 1885 aa15.19■□□□□ 0.02
LMX1B-204ENST00000561065 FOXS1O43638 330 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 TSPAN12O95859 305 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 ZGLP1P0C6A0 271 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 EZRP15311 586 aaKnown RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 FBLP22087 321 aaKnown RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 RELAQ04206 551 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 ESPL1Q14674 2120 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PHKG1Q16816 387 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PLEKHN1Q494U1 663 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 GLE1Q53GS7 698 aaKnown RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 VWA2Q5GFL6 755 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 HECTD2Q5U5R9 776 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PRAMEF13Q5VWM6 474 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PRMT9Q6P2P2 845 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PAQR3Q6TCH7 311 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 IGFL3Q6UXB1 125 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 VN1R4Q7Z5H5 301 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 STRA8Q7Z7C7 330 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 GALNT11Q8NCW6 608 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 COL26A1Q96A83 441 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 NACC2Q96BF6 587 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 TSPAN17Q96FV3 270 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 PDLIM5Q96HC4 596 aaKnown RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 CRB3Q9BUF7 120 aa15.18■□□□□ 0.02
LMX1B-204ENST00000561065 MTRF1LQ9UGC7 380 aaKnown RBP15.18■□□□□ 0.02
LMX1B-204ENST00000561065 IGHEP01854 428 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 ENO2P09104 434 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 ITGA3P26006 1051 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 EMP3P54852 163 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 AP1S2P56377 157 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 AIMP2Q13155 320 aaKnown RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 DSG2Q14126 1118 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 FASTKD3Q14CZ7 662 aaKnown RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 RBBP7Q16576 425 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 SYT16Q17RD7 645 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 TUBB8Q3ZCM7 444 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 ADCK2Q7Z695 626 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 LAPTM4BQ86VI4 370 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 EFCAB3Q8N7B9 438 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 RERGQ96A58 199 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 C8orf44Q96CB5 159 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 C19orf60Q96EN9 201 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 LINGO1Q96FE5 620 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 VPS50Q96JG6 964 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 OLFM1Q99784 485 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 ATP13A2Q9NQ11 1180 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 SLAMF7Q9NQ25 335 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 SEMA3GQ9NS98 782 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 ZNF282Q9UDV7 671 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 IKZF3Q9UKT9 509 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 SCN3AQ9NY46 2000 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms