RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 NELFCDQ8IXH7 590 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 MARVELD2Q8N4S9 558 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 CPSF7Q8N684 471 aaKnown RBP3.6□□□□□ -1.83
HERC1-211ENST00000560983 SIDT2Q8NBJ9 832 aaKnown RBP3.6□□□□□ -1.83
HERC1-211ENST00000560983 PSD4Q8NDX1 1056 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 AGAP11Q8TF27 550 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 RSC1A1Q92681 617 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 FKBP10Q96AY3 582 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 ZDHHC12Q96GR4 267 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 OR2M4Q96R27 311 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 CNPPD1Q9BV87 410 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 TUBB2BQ9BVA1 445 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 C19orf24Q9BVV8 132 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 TTYH3Q9C0H2 523 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 DNAI2Q9GZS0 605 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 SPRTNQ9H040 489 aaPredicted RBP3.6□□□□□ -1.83
HERC1-211ENST00000560983 RAB33BQ9H082 229 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 SIK2Q9H0K1 926 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 PLEKHF2Q9H8W4 249 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 SERHLQ9NQF3 203 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 MRPS18AQ9NVS2 196 aaKnown RBP3.6□□□□□ -1.83
HERC1-211ENST00000560983 STMN3Q9NZ72 180 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 ZNF624Q9P2J8 865 aaPredicted RBP3.6□□□□□ -1.83
HERC1-211ENST00000560983 HESX1Q9UBX0 185 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 ATP8A1Q9Y2Q0 1164 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 TMEM98Q9Y2Y6 226 aa3.6□□□□□ -1.83
HERC1-211ENST00000560983 NCOA6Q14686 2063 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 SYNJ2BP-COX16A0A087WUM0 186 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 KIR2DS5A0A0G2JLQ3 304 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 A0A0G2JNG1 304 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 A8MX80 341 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 KIR2DS3K7RE56 304 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 AGPSO00116 658 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 MAPK13O15264 365 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 EPB41L2O43491 1005 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 ALOX12BO75342 701 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 LCA5LO95447 670 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 SOD1P00441 154 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CALCAP01258 141 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CRYABP02511 175 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 HNRNPCP07910 306 aaKnown RBP eCLIP3.59□□□□□ -1.83
HERC1-211ENST00000560983 PRR35P0CG20 571 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 VDRP11473 427 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 AMD1P17707 334 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 EGR1P18146 543 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 XRCC1P18887 633 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 CD53P19397 219 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 GPD2P43304 727 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 EPHB1P54762 984 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ABRQ12979 859 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 MFAP5Q13361 173 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 KEAP1Q14145 624 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 KIR2DS5Q14953 304 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 POLD3Q15054 466 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 ANKRD1Q15327 319 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CNGA2Q16280 664 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 PTCHD3Q3KNS1 767 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 MTX3Q5HYI7 312 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 MORN5Q5VZ52 161 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 RRAGBQ5VZM2 374 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ERAP2Q6P179 960 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ANKRD16Q6P6B7 361 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CYB5D1Q6P9G0 228 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ISLR2Q6UXK2 745 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 STXBP4Q6ZWJ1 553 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ZNF354CQ86Y25 554 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 HIPK1Q86Z02 1210 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CAMK1DQ8IU85 385 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 TMEM126BQ8IUX1 230 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CCDC65Q8IXS2 484 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 SYTL1Q8IYJ3 562 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 TTC39CQ8N584 583 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 RASSF8Q8NHQ8 419 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 GOT1L1Q8NHS2 421 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 PSMF1Q92530 271 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 HAS2Q92819 552 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 FAM149B1Q96BN6 582 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 C1orf74Q96LT6 269 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 NSMCE3Q96MG7 304 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 ZNF48Q96MX3 618 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 GPR137Q96N19 417 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 VRK1Q99986 396 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 POPDC2Q9HBU9 364 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 KCNJ16Q9NPI9 418 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 PHPT1Q9NRX4 125 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 BEX4Q9NWD9 120 aaPredicted RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 DDIT4Q9NX09 232 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 COQ3Q9NZJ6 369 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 COX16Q9P0S2 106 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 CGNQ9P2M7 1197 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 CNOT8Q9UFF9 292 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 KIAA1257Q9ULG3 409 aa3.59□□□□□ -1.83
HERC1-211ENST00000560983 PTRH2Q9Y3E5 179 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 MDC1Q14676 2089 aaKnown RBP3.59□□□□□ -1.83
HERC1-211ENST00000560983 LRP4O75096 1905 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 TRAV17A0A0B4J275 112 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 OR5K4A6NMS3 321 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 ZNF785A8K8V0 405 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 F5H697 171 aa3.58□□□□□ -1.84
HERC1-211ENST00000560983 CLDN4O14493 209 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms