RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SERPIND1P05546 499 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 PCNAP12004 261 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 EZRP15311 586 aaKnown RBP13.75□□□□□ -0.21
SMAD6-204ENST00000559931 FOLR1P15328 257 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 GRK2P25098 689 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 HNF4AP41235 474 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 CCR10P46092 362 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 PDX1P52945 283 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 RPS15AP62244 130 aaKnown RBP13.75□□□□□ -0.21
SMAD6-204ENST00000559931 SH3BP2P78314 561 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 FOXC1Q12948 553 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 RCN2Q14257 317 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 GPR19Q15760 415 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 TBCCQ15814 346 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 CPSF6Q16630 551 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD6-204ENST00000559931 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 LIPJQ5W064 366 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 ATG16L1Q676U5 607 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 FBXO42Q6P3S6 717 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 FRMD7Q6ZUT3 714 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 D2HGDHQ8N465 521 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 ZNF740Q8NDX6 193 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 OR4K1Q8NGD4 311 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 UBE2E3Q969T4 207 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 RERGQ96A58 199 aaPredicted RBP13.75□□□□□ -0.21
SMAD6-204ENST00000559931 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 ZFYVE21Q9BQ24 234 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 NTMT1Q9BV86 223 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 MANSC1Q9H8J5 431 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 FANCEQ9HB96 536 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 GEMIN8Q9NWZ8 242 aaKnown RBP13.75□□□□□ -0.21
SMAD6-204ENST00000559931 OCIAD1Q9NX40 245 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 PLCL2Q9UPR0 1127 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 KLK4Q9Y5K2 254 aa13.75□□□□□ -0.21
SMAD6-204ENST00000559931 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 TRBC2A0A5B9 178 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 TMEM114B3SHH9 223 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 UGDHO60701 494 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 PRAMEF4O60810 478 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 WFS1O76024 890 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 OR4F21O95013 312 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 JMJD7P0C870 316 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 HGFP14210 728 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 SERPINB5P36952 375 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 CASP2P42575 452 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 SLC1A6P48664 564 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 PKNOX1P55347 436 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-204ENST00000559931 ACY1Q03154 408 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 TUBB3Q13509 450 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 ARL13AQ5H913 290 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-204ENST00000559931 PRAMEF9Q5VWM5 478 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 GRHL2Q6ISB3 625 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 MED27Q6P2C8 311 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 TMIGD1Q6UXZ0 262 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 MARCH9Q86YJ5 346 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 CACTIN-AS1Q8N1I8 211 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 METTL6Q8TCB7 284 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 CCT6BQ92526 530 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 MAGEB10Q96LZ2 347 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-204ENST00000559931 FCRL4Q96PJ5 515 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 OR6C1Q96RD1 312 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 FGF21Q9NSA1 209 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 SLC39A1Q9NY26 324 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 SERTAD3Q9UJW9 196 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 LOXL2Q9Y4K0 774 aa13.74□□□□□ -0.21
SMAD6-204ENST00000559931 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 SPTBP11277 2137 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 LOC105369274A0A096LPK9 316 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 LOC102723532A0A0G2JNH3 316 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ANKDD1BA6NHY2 528 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 H0YGG7 62 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 FFAR3O14843 346 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 GPR42O15529 346 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 LCMT2O60294 686 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 SRPX2O60687 465 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 STATHP02808 62 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 CCL4P13236 92 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 HMOX2P30519 316 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 BCL6P41182 706 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 MAPK10P53779 464 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ARF3P61204 181 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ABCE1P61221 599 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 REEP5Q00765 189 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 RELAQ04206 551 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 PCDH1Q08174 1060 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 TRAF3Q13114 568 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ZRSR2Q15696 482 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 SGO1Q5FBB7 561 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms