RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NINQ8N4C6 2090 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 NAV3Q8IVL0 2385 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
TPM1-220ENST00000559556 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 GOLGA8KD6RF30 607 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 GOLGA8TH3BQL2 631 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 WFS1O76024 890 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 WDPCPO95876 746 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 SLC16A8O95907 504 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 UQCRHP07919 91 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 CYC1P08574 325 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 ICAM2P13598 275 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 KCNJ11Q14654 390 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 SYT16Q17RD7 645 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 MCEMP1Q8IX19 187 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 ZNF480Q8WV37 535 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 MOCOSQ96EN8 888 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 CCDC120Q96HB5 630 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 IMMP1LQ96LU5 166 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 TUBB6Q9BUF5 446 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 YIPF2Q9BWQ6 316 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.42
TPM1-220ENST00000559556 INTS10Q9NVR2 710 aaKnown RBP12.41□□□□□ -0.42
TPM1-220ENST00000559556 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
TPM1-220ENST00000559556 PCYOX1Q9UHG3 505 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
TPM1-220ENST00000559556 EXPH5Q8NEV8 1989 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 A0A0A6YYC8 382 aaPredicted RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 E5RI56 91 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 E7ENX8 843 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 I3L1I5 382 aaPredicted RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 HAT1O14929 419 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 PRAMEF2O60811 474 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 UNC5CO95185 931 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 RASAL1O95294 804 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 F10P00742 488 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 CRYABP02511 175 aaKnown RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 C8orf89P0DMQ9 161 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 CHRM3P20309 590 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 MST1P26927 711 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 CA7P43166 264 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 CLCN7P51798 805 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 ABATP80404 500 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 TAP2Q03519 686 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 TSTA3Q13630 321 aaPredicted RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.4□□□□□ -0.429e-6■■■■□ 24.9
TPM1-220ENST00000559556 MEI1Q5TIA1 1274 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 MTFR2Q6P444 385 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 TMEM207Q6UWW9 146 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 CENPUQ71F23 418 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 REXO1L1PQ8IX06 675 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 PPFIBP2Q8ND30 876 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 GIMAP7Q8NHV1 300 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 PKP4Q99569 1192 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
TPM1-220ENST00000559556 TSGA10Q9BZW7 698 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 RBSNQ9H1K0 784 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 RUBCNLQ9H714 662 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 KLHL42Q9P2K6 505 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 VPS9D1Q9Y2B5 631 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 PCDHGB6Q9Y5F9 930 aa12.4□□□□□ -0.42
TPM1-220ENST00000559556 TCRBV7S3A2A0A539 114 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 H0YIG0 161 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 SMAPO00193 183 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 NSA2O95478 260 aaKnown RBP12.39□□□□□ -0.43
TPM1-220ENST00000559556 PAMP19021 973 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 PTGER4P35408 488 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
TPM1-220ENST00000559556 SNRPNP63162 240 aaKnown RBP12.39□□□□□ -0.43
TPM1-220ENST00000559556 ZNF33BQ06732 778 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 NDUFA9Q16795 377 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 PLAG1Q6DJT9 500 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 H3F3CQ6NXT2 135 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 RPTNQ6XPR3 784 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 BNC2Q6ZN30 1099 aaPredicted RBP12.39□□□□□ -0.43
TPM1-220ENST00000559556 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
TPM1-220ENST00000559556 SUN3Q8TAQ9 357 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 ASB11Q8WXH4 323 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 SLC30A3Q99726 388 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 SEC14L3Q9UDX4 400 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 TEKT2Q9UIF3 430 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 GUCA1BQ9UMX6 200 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
TPM1-220ENST00000559556 MPDZO75970 2070 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 TRGV8A0A0C4DH27 118 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 GFYI3L273 518 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 CCL21O00585 134 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 SEC24DO94855 1032 aaPredicted RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 MYBL2P10244 700 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 ENO3P13929 434 aaPredicted RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 IMPA1P29218 277 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 CDC25BP30305 580 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms