RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 E7ENX8 843 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 UBXN7O94888 489 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CLDN9O95484 217 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CD1EP15812 388 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 HMOX2P30519 316 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 MRPL19P49406 292 aaKnown RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 HTR6P50406 440 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 TAP2Q03519 686 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 Q6ZSR9 355 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 SPATA19Q7Z5L4 167 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 SPRED1Q7Z699 444 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 C2orf73Q8N5S3 287 aaPredicted RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 L3MBTL4Q8NA19 623 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 OR2T11Q8NH01 316 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 NETO1Q8TDF5 533 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 RSC1A1Q92681 617 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 PYCR2Q96C36 320 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CDC6Q99741 560 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CCDC3Q9BQI4 270 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 ATG10Q9H0Y0 220 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 SLC22A14Q9Y267 594 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 A0A1W2PPV9 198 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 ZNF839A8K0R7 811 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 TM4SF5O14894 197 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CASC3O15234 703 aaKnown RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 PRICKLE3O43900 615 aaPredicted RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 PRAMEF4O60810 478 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 PROS1P07225 676 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 TYRP1P17643 537 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 ALDH4A1P30038 563 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 PEBP1P30086 187 aaKnown RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 ELF3P78545 371 aaPredicted RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 NAE1Q13564 534 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 PRAMEF9Q5VWM5 478 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 SCIMPQ6UWF3 145 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 SYTL1Q8IYJ3 562 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 Q8N9G6 341 aaPredicted RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 SNX31Q8N9S9 440 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 USP7Q93009 1102 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 MAGEB10Q96LZ2 347 aaPredicted RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 RTKNQ9BST9 563 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 INTS7Q9NVH2 962 aaKnown RBP15.92■□□□□ 0.14
TPM1-219ENST00000559397 RIC8BQ9NVN3 520 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 GIMAP2Q9UG22 337 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
TPM1-219ENST00000559397 LOC100653049A0A140TA62 436 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 OR6C74A6NCV1 312 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 OR5K3A6NET4 321 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 TNFSF14O43557 240 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 KRT34O76011 436 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 CHRM5P08912 532 aaPredicted RBP15.91■□□□□ 0.14
TPM1-219ENST00000559397 ARL1P40616 181 aaPredicted RBP15.91■□□□□ 0.14
TPM1-219ENST00000559397 ACADVLP49748 655 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 TBPL1P62380 186 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 GPLD1P80108 840 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 ABRAXAS2Q15018 415 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 NKAIN2Q5VXU1 208 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 SUSD1Q6UWL2 747 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 TRIM46Q7Z4K8 759 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 THOC6Q86W42 341 aaKnown RBP15.91■□□□□ 0.14
TPM1-219ENST00000559397 SNX32Q86XE0 403 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 FLVCR1-AS1Q8TAF5 88 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 SMPDL3AQ92484 453 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 SGPP1Q9BX95 441 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 EPB41L1Q9H4G0 881 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 ACTR8Q9H981 624 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 HRASLS2Q9NWW9 162 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 SPHK1Q9NYA1 384 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 PCM1Q15154 2024 aa15.91■□□□□ 0.14
TPM1-219ENST00000559397 PCNX2A6NKB5 2137 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 PSMD12O00232 456 aaPredicted RBP15.9■□□□□ 0.14
TPM1-219ENST00000559397 MANBAO00462 879 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 UGDHO60701 494 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 WFS1O76024 890 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 GP1BAP07359 652 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 AMD1P17707 334 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 POLR2CP19387 275 aaPredicted RBP15.9■□□□□ 0.14
TPM1-219ENST00000559397 GPX3P22352 226 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 CD1CP29017 333 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 CAPZBP47756 277 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 CFHR1Q03591 330 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 SQSTM1Q13501 440 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 CYLC2Q14093 348 aaPredicted RBP15.9■□□□□ 0.14
TPM1-219ENST00000559397 GSTA3Q16772 222 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 GLRX5Q86SX6 157 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 OOSP2Q86WS3 158 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 C10orf67Q8IYJ2 551 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 OR10G6Q8NH81 332 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 MMADHCQ9H3L0 296 aaPredicted RBP15.9■□□□□ 0.14
TPM1-219ENST00000559397 SDR39U1Q9NRG7 319 aaPredicted RBP15.9■□□□□ 0.14
TPM1-219ENST00000559397 GPR45Q9Y5Y3 372 aa15.9■□□□□ 0.14
TPM1-219ENST00000559397 A0A1W2PQM1 296 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 PEX11AO75192 247 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ERVK-8P63133 956 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 CCL7P80098 99 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 E2F2Q14209 437 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 C6orf136Q5SQH8 315 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 LIPJQ5W064 366 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms