RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	AP1M2	Q9Y6Q5	423 aa		6.7	□□□□□ -1.34
MARK3-215	ENST00000558787	CNTRL	Q7Z7A1	2325 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	LOC105369274	A0A096LPK9	316 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	LOC102723532	A0A0G2JNH3	316 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787		A1L4Q6	167 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PEX12	O00623	359 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	RASGRF2	O14827	1237 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PRICKLE3	O43900	615 aa	Predicted RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DPM1	O60762	260 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	NIPSNAP2	O75323	286 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	NDUFS3	O75489	264 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	SLCO2B1	O94956	709 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	AGFG2	O95081	481 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	C1orf105	O95561	183 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	ARNT	P27540	789 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	OR1D4	P47884	311 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	NPY2R	P49146	381 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	VPS41	P49754	854 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	RRAD	P55042	308 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	VSX2	P58304	361 aa	Predicted RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PLOD1	Q02809	727 aa	Predicted RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	FASTK	Q14296	549 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	ESPL1	Q14674	2120 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CCNG2	Q16589	344 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CTSL3P	Q5NE16	218 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DCAF10	Q5QP82	559 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	FHL5	Q5TD97	284 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	FRMPD2B	Q6IN97	320 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	TLDC1	Q6P9B6	456 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	UNC5D	Q6UXZ4	953 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DCUN1D3	Q8IWE4	304 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PRSS58	Q8IYP2	241 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	OR4N4	Q8N0Y3	316 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	MPP5	Q8N3R9	675 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	GALNT16	Q8N428	558 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	AMER2	Q8N7J2	671 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	OR2Y1	Q8NGV0	311 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	OR2L8	Q8NGY9	312 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PROKR1	Q8TCW9	393 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DENND1A	Q8TEH3	1009 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	INPP5D	Q92835	1189 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	PTER	Q96BW5	349 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	SNRNP40	Q96DI7	357 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	MS4A14	Q96JA4	679 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	RUNDC3B	Q96NL0	473 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	BIRC8	Q96P09	236 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	SMAD5	Q99717	465 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DHRS4	Q9BTZ2	278 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CHRNA10	Q9GZZ6	450 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	ZNF552	Q9H707	407 aa	Predicted RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	SSU72	Q9NP77	194 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	TREX1	Q9NSU2	369 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	ASF1B	Q9NVP2	202 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	SYBU	Q9NX95	663 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CTSF	Q9UBX1	484 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	DRG1	Q9Y295	367 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CRYL1	Q9Y2S2	319 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	CSAG2	Q9Y5P2	127 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	MAU2	Q9Y6X3	613 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	HIVEP3	Q5T1R4	2406 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	ITPR2	Q14571	2701 aa		6.69	□□□□□ -1.34
MARK3-215	ENST00000558787	MDC1	Q14676	2089 aa	Known RBP	6.69	□□□□□ -1.34
MARK3-215	ENST00000558787		A0A0J9YVX5	310 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787		A0A1W2PPV9	198 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CTAGE15	A4D2H0	777 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787		F8W8V4	182 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	FFAR3	O14843	346 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	GPR42	O15529	346 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	RPN2	P04844	631 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	EIF2S1	P05198	315 aa	Known RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CTAGE8	P0CG41	777 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	ITGA3	P26006	1051 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	PPARG	P37231	505 aa	Predicted RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TTPA	P49638	278 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TAGLN	Q01995	201 aa	Known RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TSTA3	Q13630	321 aa	Predicted RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	MYBPC3	Q14896	1274 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TMED2	Q15363	201 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	NKG7	Q16617	165 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CYP1B1	Q16678	543 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CYP2A13	Q16696	494 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	ACSBG2	Q5FVE4	666 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	AARS2	Q5JTZ9	985 aa	Known RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	WASHC2D	Q5SRD0	308 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	VWA5B1	Q5TIE3	1220 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	ANKRD22	Q5VYY1	191 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TTC27	Q6P3X3	843 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	TTC23L	Q6PF05	361 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	COX15	Q7KZN9	410 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	OTOA	Q7RTW8	1153 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	OVCH1	Q7RTY7	1134 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CTAGE6	Q86UF2	777 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CTAGE4	Q8IX94	777 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	POU5F2	Q8N7G0	328 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	PRELID2	Q8N945	189 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	CLEC1A	Q8NC01	280 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	SPATA4	Q8NEY3	305 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	OR2L3	Q8NG85	312 aa		6.68	□□□□□ -1.34
MARK3-215	ENST00000558787	GSDMB	Q8TAX9	411 aa		6.68	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms