RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLC36A4Q6YBV0 504 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 FAM129CQ86XR2 697 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 ABCA7Q8IZY2 2146 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 LILRA2Q8N149 483 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 LINC01555Q8NAE3 123 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 DENND6BQ8NEG7 585 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 RIMS3Q9UJD0 308 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 FBXO4Q9UKT5 387 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 KCNK6Q9Y257 313 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 FANCMQ8IYD8 2048 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 FPGTO14772 594 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 NVLO15381 856 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 BAG2O95816 211 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLC35G4P0C7Q5 338 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PTPN6P29350 595 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 AKT2P31751 481 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 DDX39BQ13838 428 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 ANGPT1Q15389 498 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 TLDC1Q6P9B6 456 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 NXPE4Q6UWF7 544 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 GCNT7Q6ZNI0 430 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PTRH1Q86Y79 214 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 HID1Q8IV36 788 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 ZNF740Q8NDX6 193 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 CADM4Q8NFZ8 388 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 TESCQ96BS2 214 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PDXPQ96GD0 296 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 METTL2AQ96IZ6 378 aaKnown RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 BMFQ96LC9 184 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 CGREF1Q99674 301 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 EFCAB11Q9BUY7 163 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 MIR1-1HGQ9H1L0 117 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLC25A37Q9NYZ2 338 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 USP22Q9UPT9 525 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 ARHGEF17Q96PE2 2063 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 A0A1W2PPC4 97 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 PRAMEF26H0Y7S4 382 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 DFNA5O60443 496 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 IL6P05231 212 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 C21orf58P58505 322 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 MEF2AQ02078 507 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 RHDQ02161 417 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 PWP1Q13610 501 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 SF1Q15637 639 aaKnown RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 LCN8Q6JVE9 175 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 ZFP1Q6P2D0 407 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 PQLC1Q8N2U9 271 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 C2orf73Q8N5S3 287 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 SETD7Q8WTS6 366 aaKnown RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 CHTF18Q8WVB6 975 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 PPM1MQ96MI6 270 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 SLC6A18Q96N87 628 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 ANKRD27Q96NW4 1050 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 DMRT3Q9NQL9 472 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 TDRKHQ9Y2W6 561 aaKnown RBP12.46□□□□□ -0.41
SMAD3-207ENST00000558763 TSC22D4Q9Y3Q8 395 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 DYRK1BQ9Y463 629 aa12.46□□□□□ -0.41
SMAD3-207ENST00000558763 WDR87Q6ZQQ6 2873 aa12.46□□□□□ -0.42
SMAD3-207ENST00000558763 PRSS38A1L453 326 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CACNB4O00305 520 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CAPNS1P04632 268 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CDH1P12830 882 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 PEX2P28328 305 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 MAPK1P28482 360 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 EEFSECP57772 596 aaKnown RBP12.45□□□□□ -0.42
SMAD3-207ENST00000558763 RPS13P62277 151 aaKnown RBP12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CTBSQ01459 385 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 LIPEQ05469 1076 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 BNIP2Q12982 314 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-207ENST00000558763 UGT8Q16880 541 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CMPK2Q5EBM0 449 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 CYP2R1Q6VVX0 501 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 SPATA24Q86W54 205 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 FAM110BQ8TC76 370 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 ORAI3Q9BRQ5 295 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 PCED1AQ9H1Q7 454 aa12.45□□□□□ -0.42
SMAD3-207ENST00000558763 TRIT1Q9H3H1 467 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms