RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZRSR2Q15696 482 aaKnown RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 NIPAL1Q6NVV3 410 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 LETMD1Q6P1Q0 360 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 FIGLAQ6QHK4 219 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 CHSY3Q70JA7 882 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 DDIASQ8IXT1 998 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 CEP70Q8NHQ1 597 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 BAHD1Q8TBE0 780 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 TWIST2Q8WVJ9 160 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 USP7Q93009 1102 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 RERGQ96A58 199 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 C19orf60Q96EN9 201 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PPP3R2Q96LZ3 170 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 SERPINI1Q99574 410 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 CCDC3Q9BQI4 270 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 RHBGQ9H310 441 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 LRRN3Q9H3W5 708 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 MEAF6Q9HAF1 191 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PDE7BQ9NP56 450 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 NPHS2Q9NP85 383 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PNPOQ9NVS9 261 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 SPHK1Q9NYA1 384 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 ZNF490Q9ULM2 529 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 RNF11Q9Y3C5 154 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PCDHGA1Q9Y5H4 931 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 MN1Q10571 1320 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 COL5A1P20908 1838 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 FRYLO94915 3013 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 OR2A25A4D2G3 310 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 MANBAO00462 879 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 SNX3O60493 162 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 SRPX2O60687 465 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 CLEC3AO75596 197 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 C9P02748 559 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 MAPK1P28482 360 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 AQP5P55064 265 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CLDN6P56747 220 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 OR1D5P58170 312 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 SKP1P63208 163 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CSNK1G2P78368 415 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CBX1P83916 185 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 GABPB1Q06547 395 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 TMEM35AQ53FP2 167 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 PERM1Q5SV97 790 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CATSPEREQ5SY80 951 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 STPG1Q5TH74 334 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 FAM219BQ5XKK7 198 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 PRSS42Q7Z5A4 293 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 Q8N9G6 341 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 CAMKVQ8NCB2 501 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 OR7G3Q8NG95 312 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 ACTRT2Q8TDY3 377 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 RSC1A1Q92681 617 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CMTM7Q96FZ5 175 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 RILPQ96NA2 401 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 QRFPRQ96P65 431 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 CDK15Q96Q40 435 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 ZFYVE21Q9BQ24 234 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 SHCBP1LQ9BZQ2 653 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 FAM107BQ9H098 131 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 AKAP7Q9P0M2 348 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 SEMA5BQ9P283 1151 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 ARL2BPQ9Y2Y0 163 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 TMED5Q9Y3A6 229 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 DNAJC15Q9Y5T4 150 aa11.91□□□□□ -0.5
TPM1-209ENST00000558072 GOLGA4Q13439 2230 aaKnown RBP11.91□□□□□ -0.5
TPM1-209ENST00000558072 A0A088AWK7 358 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 A0A0G2JND7 137 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 NPIPB8E9PQR5 432 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 PPP6CO00743 305 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 B4GAT1O43505 415 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 OR1F1O43749 312 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 CCDC22O60826 627 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 RASSF9O75901 435 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 RSL1D1O76021 490 aaKnown RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 MYO1DO94832 1006 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ANKRD34CP0C6C1 535 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 SLC35G6P0C7Q6 338 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 MSL3P1P0C860 447 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 PCNAP12004 261 aa11.9□□□□□ -0.5
TPM1-209ENST00000558072 ZNF10P21506 573 aaPredicted RBP11.9□□□□□ -0.5
TPM1-209ENST00000558072 SDHBP21912 280 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms