RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DBX2Q6ZNG2 339 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TRIM46Q7Z4K8 759 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 SPRED1Q7Z699 444 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TRIM73Q86UV7 250 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 GBP7Q8N8V2 638 aaPredicted RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 CEP70Q8NHQ1 597 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 WDR20Q8TBZ3 569 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 ZUFSPQ96AP4 578 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TUBGCP3Q96CW5 907 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 CD180Q99467 661 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 WDR55Q9H6Y2 383 aaPredicted RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 BRF2Q9HAW0 419 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TMEM9BQ9NQ34 198 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 FAM86C1Q9NVL1 165 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TRIM33Q9UPN9 1127 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 KLK4Q9Y5K2 254 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 LY6G6EA0A0G2JKS1 128 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 GOLGA8QA0A0J9YX86 632 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 GOLGA8OA6NCC3 632 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 GOLGA8NF8WBI6 632 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 FOXE1O00358 373 aaPredicted RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 DCTN3O75935 186 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 MYF5P13349 255 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 EZRP15311 586 aaKnown RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 MAGP20916 626 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 CDH3P22223 829 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 PIK3CBP42338 1070 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 RPS15AP62244 130 aaKnown RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 METTL21CQ5VZV1 264 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 GUSBP11Q6P575 273 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 FIGLAQ6QHK4 219 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 SCIMPQ6UWF3 145 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 PAQR7Q86WK9 346 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 PLXDC1Q8IUK5 500 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 FAM20CQ8IXL6 584 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 CARFQ8N187 725 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 Q8N9G6 341 aaPredicted RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 HUS1BQ8NHY5 278 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 NCSTNQ92542 709 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 MTFMTQ96DP5 389 aaKnown RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 PPP3R2Q96LZ3 170 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 SARGQ9BW04 601 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 ABCG4Q9H172 646 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 SEMA6CQ9H3T2 930 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 C1GALT1Q9NS00 363 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 FARSBQ9NSD9 589 aaKnown RBP16.19■□□□□ 0.18
SNX1-203ENST00000558040 NMRK1Q9NWW6 199 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 PTGDR2Q9Y5Y4 395 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 U3KQA8 63 aa16.19■□□□□ 0.18
SNX1-203ENST00000558040 RALGAPA1Q6GYQ0 2036 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 ATP6AP2A0A1C7CYW4 349 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 OR2A25A4D2G3 310 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 TLCD2A6NGC4 264 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 HAT1O14929 419 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 CAPN5O15484 640 aaPredicted RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 OR1F1O43749 312 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 ATP6AP2O75787 350 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 RSL1D1O76021 490 aaKnown RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 LDOC1O95751 146 aaPredicted RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 SCTRP47872 440 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 NEK2P51955 445 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 RELAQ04206 551 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 NR6A1Q15406 480 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 LSM12Q3MHD2 195 aaKnown RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 AMZ1Q400G9 498 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 ATP6AP1LQ52LC2 224 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 FAM219BQ5XKK7 198 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNX1-203ENST00000558040 ZNF740Q8NDX6 193 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 BAHD1Q8TBE0 780 aaPredicted RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 THAP11Q96EK4 314 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 CNDP2Q96KP4 475 aaKnown RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 C3orf30Q96M34 536 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 TGM7Q96PF1 710 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 OR52B2Q96RD2 323 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 HBEGFQ99075 208 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 MTERF1Q99551 399 aaKnown RBP16.18■□□□□ 0.18
SNX1-203ENST00000558040 SPNS1Q9H2V7 528 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 RHBGQ9H310 441 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 PPT2Q9UMR5 302 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 BTBD3Q9Y2F9 522 aa16.18■□□□□ 0.18
SNX1-203ENST00000558040 A0A0C4DFX4 3053 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 CABIN1Q9Y6J0 2220 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 CDX4O14627 284 aaPredicted RBP16.17■□□□□ 0.18
SNX1-203ENST00000558040 MAP3K7O43318 606 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 B4GAT1O43505 415 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 CCDC22O60826 627 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 LBPP18428 481 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 AHRP35869 848 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 PPP1CAP62136 330 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 NKAIN2Q5VXU1 208 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 WDR74Q6RFH5 385 aaPredicted RBP16.17■□□□□ 0.18
SNX1-203ENST00000558040 PRR23CQ6ZRP0 262 aa16.17■□□□□ 0.18
SNX1-203ENST00000558040 FAM92BQ6ZTR7 304 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms