RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 LCMT2O60294 686 aaKnown RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 SMIM24O75264 130 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 ERLIN1O75477 346 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 SIX3O95343 332 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 CCNYL3P0C7X3 344 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 GRK3P35626 688 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 STAT5AP42229 794 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 ALDH18A1P54886 795 aaKnown RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 MAP7Q14244 749 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 GRM7Q14831 915 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 PDK4Q16654 411 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 KRT71Q3SY84 523 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 FAM199XQ6PEV8 388 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 LRRC70Q7Z2Q7 622 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 C4orf33Q8N1A6 199 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 DTWD1Q8N5C7 304 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 METTL27Q8N6F8 245 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 HNRNPLLQ8WVV9 542 aaKnown RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 MACROD1Q9BQ69 325 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 ROPN1BQ9BZX4 212 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 ROPN1Q9HAT0 212 aaPredicted RBP13.7□□□□□ -0.22
USP3-205ENST00000557884 PELI2Q9HAT8 420 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 LHX9Q9NQ69 397 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 TXLNGQ9NUQ3 528 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 OPTCQ9UBM4 332 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 PADI1Q9ULC6 663 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 ITPR1Q14643 2758 aa13.7□□□□□ -0.22
USP3-205ENST00000557884 K7EPI3 171 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 MEN1O00255 615 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 CLGNO14967 610 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 KLK8O60259 260 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 MED26O95402 600 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SERPIND1P05546 499 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 HBQ1P09105 142 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SBK3P0C264 359 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 LIFP15018 202 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 KRT4P19013 534 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 GNAZP19086 355 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 EPORP19235 508 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 ALAS2P22557 587 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 EEF1DP29692 281 aaKnown RBP13.69□□□□□ -0.22
USP3-205ENST00000557884 RORAP35398 523 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 REEP5Q00765 189 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 ABHD18Q0P651 414 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SLBPQ14493 270 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP3-205ENST00000557884 RBBP5Q15291 538 aaKnown RBP13.69□□□□□ -0.22
USP3-205ENST00000557884 BROXQ5VW32 411 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 LCN10Q6JVE6 187 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 C19orf48Q6RUI8 117 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SLCO4C1Q6ZQN7 724 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SH2D5Q6ZV89 423 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 TTLL10Q6ZVT0 673 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 VN1R4Q7Z5H5 301 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 DSELQ8IZU8 1212 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 CNPY4Q8N129 248 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 TEX9Q8N6V9 391 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 CT55Q8WUE5 264 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 ZIM3Q96PE6 472 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 AIF1LQ9BQI0 150 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 CHST8Q9H2A9 424 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 CUTCQ9NTM9 273 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 GPRC5BQ9NZH0 403 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 SRPK3Q9UPE1 567 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 RUVBL1Q9Y265 456 aaKnown RBP13.69□□□□□ -0.22
USP3-205ENST00000557884 ANGPTL3Q9Y5C1 460 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 PCDHGA4Q9Y5G9 962 aa13.69□□□□□ -0.22
USP3-205ENST00000557884 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
USP3-205ENST00000557884 TRBC2A0A5B9 178 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 HYKKA2RU49 373 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 CCDC151A5D8V7 595 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 COPEO14579 308 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 PRAMEF4O60810 478 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 GLRA3O75311 464 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 H2AFYO75367 372 aaKnown RBP13.68□□□□□ -0.22
USP3-205ENST00000557884 KLK3P07288 261 aaPredicted RBP13.68□□□□□ -0.22
USP3-205ENST00000557884 GSTA1P08263 222 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 C1GALT1C1LP0DN25 315 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 WT1P19544 449 aaPredicted RBP13.68□□□□□ -0.22
USP3-205ENST00000557884 F8A1P23610 371 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 DLSTP36957 453 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 GCGRP47871 477 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 CYP4F2P78329 520 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 RELAQ04206 551 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 PRTGQ2VWP7 1150 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 XKR6Q5GH73 641 aa13.68□□□□□ -0.22
USP3-205ENST00000557884 BEND6Q5SZJ8 279 aaPredicted RBP13.68□□□□□ -0.22
USP3-205ENST00000557884 PRAMEF9Q5VWM5 478 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms