RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 COL4A3Q01955 1670 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 WDR17Q8IZU2 1322 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 TRAV18A0A075B6X5 111 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 A0A0G2JK05 382 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 A0A0U1RQJ8 604 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 OR5K3A6NET4 321 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ANKRD30BLA7E2S9 258 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 C17orf105B2RV13 164 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 H0Y8G0 127 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 K7EQM0 130 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 M0R296 226 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZNF197O14709 1029 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 MGST3O14880 152 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 XPO1O14980 1071 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 TLX3O43711 291 aaPredicted RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 LANCL1O43813 399 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 GPRIN2O60269 458 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 RNASEH1O60930 286 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 GRAP2O75791 330 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CHRNGP07510 517 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ADRB1P08588 477 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 SERPINF2P08697 491 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 FGF2P09038 288 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 NUDT17P0C025 328 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 RRASP10301 218 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 DLATP10515 647 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 CTSAP10619 480 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 HSPA8P11142 646 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 RPA2P15927 270 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 NAGAP17050 411 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ATP6V1C1P21283 382 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 JAK1P23458 1154 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 PLA2G5P39877 138 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 MXI1P50539 228 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZP1P60852 638 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 FKBP1BP68106 108 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CX3CL1P78423 397 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ROR2Q01974 943 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 GBE1Q04446 702 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 MYBPHQ13203 477 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 UGT3A2Q3SY77 523 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 KCTD21Q4G0X4 260 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ARMCX4Q5H9R4 360 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 TYW3Q6IPR3 259 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 KLHL10Q6JEL2 608 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 PMF1Q6P1K2 205 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 LRRC8BQ6P9F7 803 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 FAM159AQ6UWV7 190 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZNF704Q6ZNC4 412 aaPredicted RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 ANKRD33Q7Z3H0 272 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 LUZP1Q86V48 1076 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZDHHC21Q8IVQ6 265 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CHERPQ8IWX8 916 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 GBGT1Q8N5D6 347 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 SMYD1Q8NB12 490 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 NPEPL1Q8NDH3 523 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 SLC38A5Q8WUX1 472 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 PIGBQ92521 554 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 TPD52L3Q96J77 140 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZNF607Q96SK3 696 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CCDC77Q9BR77 488 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZPBPQ9BS86 351 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 C1QTNF7Q9BXJ2 289 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 CAPS2Q9BXY5 557 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 SPRY4Q9C004 299 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 VN1R1Q9GZP7 353 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ZCCHC4Q9H5U6 513 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 DCLRE1BQ9H816 532 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 C10orf88Q9H8K7 445 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 PCDH9Q9HC56 1237 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 TRPV5Q9NQA5 729 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 YAE1D1Q9NRH1 226 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 SPHK1Q9NYA1 384 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 MIS18AQ9NYP9 233 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 VPS54Q9P1Q0 977 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 KLHL8Q9P2G9 620 aaPredicted RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 KLHL9Q9P2J3 617 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 NAP1L2Q9ULW6 460 aaPredicted RBP3.56□□□□□ -1.84
TDP1-217ENST00000557782 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
TDP1-217ENST00000557782 ABCC4O15439 1325 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 TTC21BQ7Z4L5 1316 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 KIF16BQ96L93 1317 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 A0A1B0GUL7 405 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LRRIQ4A6NIV6 560 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 FAM25EA8MYX2 175 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 GAPDHSO14556 408 aaPredicted RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 PPEF2O14830 753 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ARPC2O15144 300 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 SLC22A2O15244 555 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 ACSL4O60488 711 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 LDB3O75112 727 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 CSDE1O75534 798 aaKnown RBP3.55□□□□□ -1.84
TDP1-217ENST00000557782 KIAA0754O94854 1291 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 STBD1O95210 358 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 RAF1P04049 648 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 UGT2B4P06133 528 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 CLUP10909 449 aa3.55□□□□□ -1.84
TDP1-217ENST00000557782 GNSP15586 552 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms