RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KLHL42Q9P2K6 505 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 MED16Q9Y2X0 877 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 ZGRF1Q86YA3 2104 aa15.11■□□□□ 0.01
SCFD1-224ENST00000557713 DIDO1Q9BTC0 2240 aaKnown RBP15.11■□□□□ 0.01
SCFD1-224ENST00000557713 APCP25054 2843 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 OR5H15A6NDH6 313 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 GFYI3L273 518 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 SMAPO00193 183 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 UNC5CO95185 931 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 RASAL1O95294 804 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 CRYABP02511 175 aaKnown RBP15.1■□□□□ 0.01
SCFD1-224ENST00000557713 FGGP02679 453 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 MPC1LP0DKB6 136 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 CDC25BP30305 580 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 AP2B1P63010 937 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 GAS2L3Q86XJ1 694 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 PLD3Q8IV08 490 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 SHISA5Q8N114 240 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 GIMAP7Q8NHV1 300 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 MAIP1Q8WWC4 291 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 ITLN2Q8WWU7 325 aaPredicted RBP15.1■□□□□ 0.01
SCFD1-224ENST00000557713 CYTH2Q99418 400 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 EBNA1BP2Q99848 306 aaKnown RBP15.1■□□□□ 0.01
SCFD1-224ENST00000557713 VPS9D1Q9Y2B5 631 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 KLF2Q9Y5W3 355 aaPredicted RBP15.1■□□□□ 0.01
SCFD1-224ENST00000557713 CPAMD8Q8IZJ3 1885 aa15.1■□□□□ 0.01
SCFD1-224ENST00000557713 KCNE1BA0A087WTH5 132 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 H0YIG0 161 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 H7BY64 318 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 PRAMEF2O60811 474 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 C8orf89P0DMQ9 161 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 PAMP19021 973 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 GRNP28799 593 aaKnown RBP15.09■□□□□ 0.01
SCFD1-224ENST00000557713 SKIV2L2P42285 1042 aaKnown RBP15.09■□□□□ 0.01
SCFD1-224ENST00000557713 MAGEA6P43360 314 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 AVPR1BP47901 424 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 SRSF11Q05519 484 aaKnown RBP15.09■□□□□ 0.01
SCFD1-224ENST00000557713 NDUFA9Q16795 377 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 TTLL9Q3SXZ7 439 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 ABHD17BQ5VST6 288 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 H3F3CQ6NXT2 135 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 ZNF549Q6P9A3 640 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 TMEM207Q6UWW9 146 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 CAND1Q86VP6 1230 aaKnown RBP15.09■□□□□ 0.01
SCFD1-224ENST00000557713 MCEMP1Q8IX19 187 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 SPC24Q8NBT2 197 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 OR9A4Q8NGU2 314 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 SUN3Q8TAQ9 357 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 PRAP1Q96NZ9 151 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 VN1R1Q9GZP7 353 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 ABCF3Q9NUQ8 709 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 TMEM184CQ9NVA4 438 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 SEC14L3Q9UDX4 400 aa15.09■□□□□ 0.01
SCFD1-224ENST00000557713 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 TRGV8A0A0C4DH27 118 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 FAM237BA0A1B0GVD1 139 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 MAGEB16A2A368 324 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 ZBTB14O43829 449 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 WISP2O76076 250 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 NSA2O95478 260 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 SYF2O95926 243 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 UQCRHP07919 91 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 CYC1P08574 325 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 F7P08709 466 aaPredicted RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 ELAVL4P26378 380 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 IMPA1P29218 277 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 CA7P43166 264 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 TERF1P54274 439 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 SARNPP82979 210 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 ZNF33BQ06732 778 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 CUL1Q13616 776 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 NAA30Q147X3 362 aaPredicted RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 TRIP13Q15645 432 aaPredicted RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.08■□□□□ 0
SCFD1-224ENST00000557713 VN1R4Q7Z5H5 301 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 CPEB2Q7Z5Q1 589 aaKnown RBP15.08■□□□□ 0
SCFD1-224ENST00000557713 ADCK2Q7Z695 626 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 DENND6AQ8IWF6 608 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 METTL21AQ8WXB1 218 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 KCNJ9Q92806 393 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 CCDC120Q96HB5 630 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 RUBCNLQ9H714 662 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 TEKT2Q9UIF3 430 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 DHRS7Q9Y394 339 aa15.08■□□□□ 0
SCFD1-224ENST00000557713 HEATR5BQ9P2D3 2071 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 SVILO95425 2214 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 IGHV3-20A0A0C4DH32 117 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 ZCWPW2A0A1B0GU75 182 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 CTAGE9A4FU28 777 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 A8MUI8 341 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 CCL21O00585 134 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 SEC24DO94855 1032 aaPredicted RBP15.07■□□□□ 0
SCFD1-224ENST00000557713 STATHP02808 62 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 MYBL2P10244 700 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 ENO3P13929 434 aaPredicted RBP15.07■□□□□ 0
SCFD1-224ENST00000557713 HRH2P25021 359 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 CTBP1Q13363 440 aa15.07■□□□□ 0
SCFD1-224ENST00000557713 THEMIS2Q5TEJ8 643 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms