RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LIME1Q9H400 295 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SOHLH2Q9NX45 425 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 COQ3Q9NZJ6 369 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 KCMF1Q9P0J7 381 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 IL17CQ9P0M4 197 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TINAGQ9UJW2 476 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 DNAJC16Q9Y2G8 782 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 MRPS2Q9Y399 296 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SONP18583 2426 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 C17orf113A0A1B0GUU1 675 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 GTPBP10A4D1E9 387 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 OR6C74A6NCV1 312 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SIGLEC16A6NMB1 481 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 H3BMH7 237 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ADAM10O14672 748 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PSMA7O14818 248 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 USP1O94782 785 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ZWINTO95229 277 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 MLYCDO95822 493 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 LY6G6DO95868 133 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 JUNP05412 331 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 KRT3P12035 628 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CDH3P22223 829 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 FDXRP22570 491 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 MMP8P22894 467 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 IL4RP24394 825 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PON1P27169 355 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PRDX3P30048 256 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 HCAR3P49019 387 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 DGKQP52824 942 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 DRG2P55039 364 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 TPI1P60174 286 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 RPL26P61254 145 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 EXOC3L4Q17RC7 722 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SLC5A12Q1EHB4 618 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 NKAIN1Q4KMZ8 207 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 TMEM177Q53S58 311 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ANKRD20A8PQ5CZ79 823 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ATG9BQ674R7 924 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PDPK2PQ6A1A2 396 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SCYL2Q6P3W7 929 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 WDR59Q6PJI9 974 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 GBP6Q6ZN66 633 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 RHOUQ7L0Q8 258 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 C11orf96Q7Z7L8 435 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 AMZ2Q86W34 360 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 DOLPP1Q86YN1 238 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 BBS5Q8N3I7 341 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PGBD5Q8N414 524 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 WFDC11Q8NEX6 87 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 OR11G2Q8NGC1 345 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CCHCR1Q8TD31 782 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ASB5Q8WWX0 329 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PSMF1Q92530 271 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SDCCAG3Q96C92 435 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CCDC34Q96HJ3 373 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 MAGED4Q96JG8 741 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PPM1MQ96MI6 270 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 GPR137Q96N19 417 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CRACR2AQ9BSW2 395 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 NAA15Q9BXJ9 866 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PITPNM3Q9BZ71 974 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CHRNA10Q9GZZ6 450 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SLC26A1Q9H2B4 701 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 KIR3DX1Q9H7L2 352 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 WDR54Q9H977 334 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 MRM3Q9HC36 420 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 KCNJ16Q9NPI9 418 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SLC22A11Q9NSA0 550 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 SEPT11Q9NVA2 429 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PKD2L2Q9NZM6 624 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 TRIM10Q9UDY6 481 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 TRPS1Q9UHF7 1281 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 CDC23Q9UJX2 597 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ADAM21Q9UKJ8 722 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 POMT2Q9UKY4 750 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 RPL26L1Q9UNX3 145 aaKnown RBP4.5□□□□□ -1.69
SCFD1-223ENST00000557076 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 ANKRD36A6QL64 1941 aa4.5□□□□□ -1.69
SCFD1-223ENST00000557076 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 DFFAO00273 331 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PPP1R12AO14974 1030 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 DAPK3O43293 454 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ASNA1O43681 348 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 FAM20BO75063 409 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 OR2B3O76000 313 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 SLCO2B1O94956 709 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 BMP10O95393 424 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 HPP00738 406 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PRR35P0CG20 571 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PIM1P11309 404 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ERCC2P18074 760 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 POLR2CP19387 275 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ITGAXP20702 1163 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 CHRNB4P30926 498 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 PPP1R2P41236 205 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 ZNF135P52742 658 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-223ENST00000557076 EPHB1P54762 984 aa4.49□□□□□ -1.69
SCFD1-223ENST00000557076 GSCP56915 257 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms