RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RAD51BO15315 384 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SLC16A5O15375 505 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 DCXO43602 365 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NIPSNAP2O75323 286 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TULP3O75386 442 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SUPT3HO75486 399 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ECI2O75521 394 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CRCPO75575 148 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CIB2O75838 187 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 KRT34O76011 436 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CSPG5O95196 566 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SLC25A14O95258 325 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 TRIM16O95361 564 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ATP6V1G2O95670 118 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TSPAN12O95859 305 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 UGT2B4P06133 528 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ENO1P06733 434 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 OR56A5P0C7T3 313 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 PRSS56P0CW18 603 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 HKR1P10072 659 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ITGAMP11215 1152 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 COX4I1P13073 169 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ENO3P13929 434 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 MTHFD2P13995 350 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 KCNA5P22460 613 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SP100P23497 879 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 EPHA3P29320 983 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SPINT3P49223 89 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 RAP1GDS1P52306 607 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 PKNOX1P55347 436 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MXRA7P84157 204 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ARHGAP8P85298 464 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 GRIK2Q13002 908 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 STX5Q13190 355 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 KCNC3Q14003 757 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CYLC2Q14093 348 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 NAA25Q14CX7 972 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 HERC3Q15034 1050 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 PTPRRQ15256 657 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MAPRE2Q15555 327 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 OR4D1Q15615 310 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TSNQ15631 228 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 GEN1Q17RS7 908 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 LRIT3Q3SXY7 679 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 UGT3A2Q3SY77 523 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SLC9B1Q4ZJI4 515 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 C2orf27AQ580R0 203 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CTSL3PQ5NE16 218 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ZNF362Q5T0B9 420 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 GPRC6AQ5T6X5 926 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 VWA5B1Q5TIE3 1220 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 LRRC66Q68CR7 880 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TMEM215Q68D42 235 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NXNQ6DKJ4 435 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 FAM109BQ6ICB4 259 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 CES5AQ6NT32 575 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 RINLQ6ZS11 566 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 DOK3Q7L591 496 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 DSG4Q86SJ6 1040 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ADAMTSL2Q86TH1 951 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 PLXDC1Q8IUK5 500 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 YAF2Q8IY57 180 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MYO1HQ8N1T3 1032 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CPA6Q8N4T0 437 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ZBTB2Q8N680 514 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 DEFB123Q8N688 67 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SIDT2Q8NBJ9 832 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 GPR26Q8NDV2 337 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 OR56A4Q8NGH8 313 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 AGR3Q8TD06 166 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CD200R1Q8TD46 325 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 FGF13Q92913 245 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 FUBP1Q96AE4 644 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 PTERQ96BW5 349 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MRPL38Q96DV4 380 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 LINGO1Q96FE5 620 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MAELQ96JY0 434 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 LRRC3BQ96PB8 259 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 LENG8Q96PV6 779 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 OR52B2Q96RD2 323 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ATOH8Q96SQ7 321 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 GDF15Q99988 308 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 RTKNQ9BST9 563 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 HGH1Q9BTY7 390 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ZSCAN5AQ9BUG6 496 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SPATA5L1Q9BVQ7 753 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CADM1Q9BY67 442 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 MRPL1Q9BYD6 325 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 FAM126AQ9BYI3 521 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 TRIM54Q9BYV2 358 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NUF2Q9BZD4 464 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SHCBP1LQ9BZQ2 653 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 UNKQ9C0B0 810 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 WDR55Q9H6Y2 383 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 EFCAB1Q9HAE3 211 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MEAF6Q9HAF1 191 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 ZFP14Q9HCL3 533 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SARS2Q9NP81 518 aaKnown RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 MID1IP1Q9NPA3 183 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms