RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GARNL3Q5VVW2 1013 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PLAG1Q6DJT9 500 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 H3F3CQ6NXT2 135 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PPP1R21Q6ZMI0 780 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CPEB2Q7Z5Q1 589 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PAQR7Q86WK9 346 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 DOLPP1Q86YN1 238 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CRLF3Q8IUI8 442 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CNGA4Q8IV77 575 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 SIAH3Q8IW03 269 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 MAGEC3Q8TD91 643 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 RERGQ96A58 199 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 SCMH1Q96GD3 660 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 MRFAP1L1Q96HT8 127 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF354BQ96LW1 612 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 FOPNLQ96NB1 174 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PANX3Q96QZ0 392 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 UTP23Q9BRU9 249 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 KCNK13Q9HB14 408 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CATSPERZQ9NTU4 200 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 SPATA7Q9P0W8 599 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 TAC3Q9UHF0 121 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ANAPC5Q9UJX4 755 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 RIMKLBQ9ULI2 386 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PPT2Q9UMR5 302 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ABCA4P78363 2273 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 GOLGA6L9A6NEM1 432 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 SOWAHDA6NJG2 315 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ERI2A8K979 691 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 AKR1B15C9JRZ8 316 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 E9PLN8 166 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ADAM10O14672 748 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 KPNA5O15131 536 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 CD3EAPO15446 510 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 STATHP02808 62 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 CD46P15529 392 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 AVPR1BP47901 424 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 TTPAP49638 278 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ART1P52961 327 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 NAP1L1P55209 391 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 OC90Q02509 493 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM53BQ14153 422 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 SPA17Q15506 151 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 MEP1AQ16819 746 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ICE2Q659A1 982 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF425Q6IV72 752 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 FGD2Q7Z6J4 655 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 PLD3Q8IV08 490 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 CHERPQ8IWX8 916 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 GHDCQ8N2G8 530 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 TMEM178AQ8NBL3 297 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 OR9A1PQ8NGU1 263 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 OR9A4Q8NGU2 314 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 PHF10Q8WUB8 498 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 SMPDL3AQ92484 453 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 DMRTA2Q96SC8 542 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 CYTH2Q99418 400 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 NPAS2Q99743 824 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 TREX2Q9BQ50 279 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 P2RY12Q9H244 342 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 ETNK1Q9HBU6 452 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 CHRAC1Q9NRG0 131 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 C19orf25Q9UFG5 118 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 PCYOX1Q9UHG3 505 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 TCAF1Q9Y4C2 921 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 DUSP10Q9Y6W6 482 aa8.52□□□□□ -1.05
HNRNPC-227ENST00000556897 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 TCRBV7S2A1N4TA0A589 114 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 GABRR3A8MPY1 467 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ARHGEF33A8MVX0 844 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 E7EVH7 732 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 H0YIG0 161 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 TXNDC9O14530 226 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PRRG2O14669 202 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 SNPHO15079 494 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 NDUFS3O75489 264 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 NEURL1O76050 574 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 SUN1O94901 812 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 MATN4O95460 622 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 TSPAN12O95859 305 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 SP1P08047 785 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ERGP11308 486 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PKMP14618 531 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF24P17028 368 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 RPS3P23396 243 aaKnown RBP eCLIP8.51□□□□□ -1.053e-12■□□□□ 10.8
HNRNPC-227ENST00000556897 XCR1P46094 333 aa8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 EIF3BP55884 814 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 PRDX1Q06830 199 aaKnown RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 KLF1Q13351 362 aaPredicted RBP8.51□□□□□ -1.05
HNRNPC-227ENST00000556897 MAPKAPK3Q16644 382 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms