RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SH3BP2P78314 561 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 REEP5Q00765 189 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 LCP2Q13094 533 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
TUBB3-211ENST00000556536 TBCCQ15814 346 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 SYVN1Q86TM6 617 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 KMT5CQ86Y97 462 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 D2HGDHQ8N465 521 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 DNAJC22Q8N4W6 341 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 SREK1Q8WXA9 508 aaKnown RBP16.69■□□□□ 0.26
TUBB3-211ENST00000556536 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
TUBB3-211ENST00000556536 CNDP1Q96KN2 507 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 DEPDC7Q96QD5 511 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 NTMT1Q9BV86 223 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 EHD1Q9H4M9 534 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-211ENST00000556536 ACTR8Q9H981 624 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 INTS9Q9NV88 658 aaKnown RBP16.69■□□□□ 0.26
TUBB3-211ENST00000556536 PILRAQ9UKJ1 303 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 RNF11Q9Y3C5 154 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 ZFYVE26Q68DK2 2539 aa16.69■□□□□ 0.26
TUBB3-211ENST00000556536 ANKRD12Q6UB98 2062 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 IGF2RP11717 2491 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 FAM149AA5PLN7 773 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 ITM2AO43736 263 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 LCMT2O60294 686 aaKnown RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 MLYCDO95822 493 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 OTCP00480 354 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 CHRNGP07510 517 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 CTSBP07858 339 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 FOLR1P15328 257 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 GABRA4P48169 554 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 CYP4F3Q08477 520 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 TARDBPQ13148 414 aaKnown RBP eCLIP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 E2F2Q14209 437 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 RCN2Q14257 317 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 ARL13AQ5H913 290 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 LETMD1Q6P1Q0 360 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 MILR1Q7Z6M3 343 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 TMPRSS12Q86WS5 348 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 MYLK4Q86YV6 388 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 CHCHD4Q8N4Q1 142 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 L3MBTL4Q8NA19 623 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 OR4F6Q8NGB9 312 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 AGAP11Q8TF27 550 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 ZNF382Q96SR6 550 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 CHRNA10Q9GZZ6 450 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 DRC3Q9H069 523 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 TNFRSF12AQ9NP84 129 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 OCIAD1Q9NX40 245 aa16.68■□□□□ 0.26
TUBB3-211ENST00000556536 SIDT1Q9NXL6 827 aaKnown RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 ZNF490Q9ULM2 529 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 DSPP15924 2871 aaKnown RBP16.68■□□□□ 0.26
TUBB3-211ENST00000556536 KCNE1BA0A087WTH5 132 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 A0A0J9YVX5 310 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 PMS2P1A4D2B8 440 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 TMX2-CTNND1H3BSU7 103 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 H2AFYO75367 372 aaKnown RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 LYPLA1O75608 230 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 OR4F21O95013 312 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 CLDN9O95484 217 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 JUPP14923 745 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 EZRP15311 586 aaKnown RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 ARL1P40616 181 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 BCL6P41182 706 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 NAA20P61599 178 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 BST1Q10588 318 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 GPR19Q15760 415 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 LIPJQ5W064 366 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 FRMPD2BQ6IN97 320 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 GRHL2Q6ISB3 625 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 GPRIN3Q6ZVF9 776 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 RNF44Q7L0R7 432 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 MCATQ8IVS2 390 aaKnown RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 ZCCHC14Q8WYQ9 949 aaKnown RBP16.67■□□□□ 0.26
TUBB3-211ENST00000556536 AIF1LQ9BQI0 150 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 EFCAB11Q9BUY7 163 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 STRADBQ9C0K7 418 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 C20orf27Q9GZN8 174 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 MID1IP1Q9NPA3 183 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 FAM53CQ9NYF3 392 aa16.67■□□□□ 0.26
TUBB3-211ENST00000556536 LOC105369274A0A096LPK9 316 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 LOC102723532A0A0G2JNH3 316 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 A0A1W2PNU3 283 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 TRBC2A0A5B9 178 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 EFCAB7A8K855 629 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 TMEM114B3SHH9 223 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 OR1F1O43749 312 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 HYAL3O43820 417 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-211ENST00000556536 CCL4P13236 92 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 GRK2P25098 689 aa16.66■□□□□ 0.26
TUBB3-211ENST00000556536 SCTRP47872 440 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms