RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 C5orf34Q96MH7 638 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 TGIF2Q9GZN2 237 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 TMEM184CQ9NVA4 438 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 PTGFRNQ9P2B2 879 aa21.46■■□□□ 1.03
ACTN1-220ENST00000556433 NBPF19A0A087WUL8 3843 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 EIF3FO00303 357 aaPredicted RBP21.45■■□□□ 1.02
ACTN1-220ENST00000556433 SERPINA7P05543 415 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 PRR35P0CG20 571 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 FNTAP49354 379 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 PTK6Q13882 451 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 FAM53BQ14153 422 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 UGT3A1Q6NUS8 523 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 MCOLN3Q8TDD5 553 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 ACTRT1Q8TDG2 376 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 OSBPL9Q96SU4 736 aa21.45■■□□□ 1.02
ACTN1-220ENST00000556433 TRMT6Q9UJA5 497 aaKnown RBP21.45■■□□□ 1.02
ACTN1-220ENST00000556433 POLEQ07864 2286 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 IGHV1-45A0A0A0MS14 117 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 GOLGA6L10A0A0M3HER8 536 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 STATHP02808 62 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 HRH2P25021 359 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 AVPR1BP47901 424 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 ARG2P78540 354 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 MAT1AQ00266 395 aaKnown RBP21.44■■□□□ 1.02
ACTN1-220ENST00000556433 PPP1R7Q15435 360 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 RNASEH2BQ5TBB1 312 aaKnown RBP21.44■■□□□ 1.02
ACTN1-220ENST00000556433 SLC35F6Q8N357 371 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 OR1N1Q8NGS0 311 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 BRIX1Q8TDN6 353 aaKnown RBP21.44■■□□□ 1.02
ACTN1-220ENST00000556433 EEF1AKMT1Q8WVE0 214 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 FAR1Q8WVX9 515 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 PSMF1Q92530 271 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 CCDC138Q96M89 665 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 NDNQ99608 321 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 CCDC177Q9NQR7 707 aaPredicted RBP21.44■■□□□ 1.02
ACTN1-220ENST00000556433 PLA2G3Q9NZ20 509 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 MKL2Q9ULH7 1088 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 MRPS2Q9Y399 296 aaKnown RBP21.44■■□□□ 1.02
ACTN1-220ENST00000556433 NOTCH2Q04721 2471 aa21.44■■□□□ 1.02
ACTN1-220ENST00000556433 PCDH17O14917 1159 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 WFS1O76024 890 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 PGAM1P18669 254 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 FDXRP22570 491 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 RGS4P49798 205 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 LRRC8EQ6NSJ5 796 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 MAMDC2Q7Z304 686 aaPredicted RBP21.43■■□□□ 1.02
ACTN1-220ENST00000556433 ZC3H7AQ8IWR0 971 aaKnown RBP21.43■■□□□ 1.02
ACTN1-220ENST00000556433 SIRT6Q8N6T7 355 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 C2CD4AQ8NCU7 369 aaPredicted RBP21.43■■□□□ 1.02
ACTN1-220ENST00000556433 OR9A4Q8NGU2 314 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 RIC8BQ9NVN3 520 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 ADAMTS6Q9UKP5 1117 aa21.43■■□□□ 1.02
ACTN1-220ENST00000556433 KCNE1BA0A087WTH5 132 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 LOC102723996A0A087X1L8 192 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 A0A1W2PQ72 361 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 DYTNA2CJ06 578 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 BMP10O95393 424 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 CLDN1O95832 211 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 UQCRHP07919 91 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 COL8A1P27658 744 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 SOX11P35716 441 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 RPS15AP62244 130 aaKnown RBP21.42■■□□□ 1.02
ACTN1-220ENST00000556433 TBPL1P62380 186 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 SNRPNP63162 240 aaKnown RBP21.42■■□□□ 1.02
ACTN1-220ENST00000556433 TIAL1Q01085 375 aaKnown RBP eCLIP21.42■■□□□ 1.024e-6■■■□□ 18.3
ACTN1-220ENST00000556433 CRYMQ14894 314 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 RPUSD3Q6P087 351 aaKnown RBP21.42■■□□□ 1.02
ACTN1-220ENST00000556433 PALM2Q8IXS6 379 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 GABPB2Q8TAK5 448 aaPredicted RBP21.42■■□□□ 1.02
ACTN1-220ENST00000556433 PCBD2Q9H0N5 130 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 ATG10Q9H0Y0 220 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 TAS2R13Q9NYV9 303 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 PDE10AQ9Y233 779 aa21.42■■□□□ 1.02
ACTN1-220ENST00000556433 H0YIG0 161 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 E2F3O00716 465 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 C8GP07360 202 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 CELA2AP08217 269 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 EDN3P14138 238 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 GABRB3P28472 473 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 DHX9Q08211 1270 aaKnown RBP21.41■■□□□ 1.02
ACTN1-220ENST00000556433 PCOLCEQ15113 449 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 AGTRAPQ6RW13 159 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 PAQR3Q6TCH7 311 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 TMEM205Q6UW68 189 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 FAM180AQ6UWF9 173 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 VN1R4Q7Z5H5 301 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 HAS2Q92819 552 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 ALKBH8Q96BT7 664 aaKnown RBP21.41■■□□□ 1.02
ACTN1-220ENST00000556433 THAP11Q96EK4 314 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 MACROD1Q9BQ69 325 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 ZNF700Q9H0M5 742 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 PARVBQ9HBI1 364 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 ASIC3Q9UHC3 531 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 OSGIN2Q9Y236 505 aa21.41■■□□□ 1.02
ACTN1-220ENST00000556433 DOPEY1Q5JWR5 2465 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 DNALI1O14645 258 aaPredicted RBP21.4■■□□□ 1.02
ACTN1-220ENST00000556433 BANF1O75531 89 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 JRKO75564 520 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 TTC4O95801 387 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 C8orf89P0DMQ9 161 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms