RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 METTL23Q86XA0 190 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 MMD2Q8IY49 270 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ANKRD13CQ8N6S4 541 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 POM121L12Q8N7R1 296 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 VANGL1Q8TAA9 524 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 DEPDC1BQ8WUY9 529 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 PHLDA1Q8WV24 401 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 RFT1Q96AA3 541 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ERO1AQ96HE7 468 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 FAM20AQ96MK3 541 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 S1PR5Q9H228 398 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 PFDN4Q9NQP4 134 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 TBC1D7Q9P0N9 293 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 POLLQ9UGP5 575 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 WDR83OSQ9Y284 106 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 HEG1Q9ULI3 1381 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 C5orf52A6NGY3 159 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 ENO4A6NNW6 628 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 PI4K2BG5E9Z4 385 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 O00370 1275 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 DNM1LO00429 736 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 GBAP04062 536 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CA6P23280 308 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 JAK1P23458 1154 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 TIA1P31483 386 aaKnown RBP eCLIP2.59□□□□□ -1.99
SCFD1-218ENST00000556256 MNDAP41218 407 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 RPL21P46778 160 aaKnown RBP2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CDH11P55287 796 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 KRT83P78385 493 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 PAX8Q06710 450 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 TAF10Q12962 218 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 EIF4EBP2Q13542 120 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-218ENST00000556256 VEZF1Q14119 521 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 UGCGQ16739 394 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 ODF4Q2M2E3 257 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 ALDH1L2Q3SY69 923 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CCDC184Q52MB2 194 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 XKR3Q5GH77 459 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 MPP7Q5T2T1 576 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 SUSD4Q5VX71 490 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CAVIN1Q6NZI2 390 aaKnown RBP2.59□□□□□ -1.99
SCFD1-218ENST00000556256 DNAJB7Q7Z6W7 309 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-218ENST00000556256 TIGD4Q8IY51 512 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 OR52N5Q8NH56 324 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 HPSE2Q8WWQ2 592 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 PIGBQ92521 554 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 RAD54LQ92698 747 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CORO2AQ92828 525 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 MR1Q95460 341 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 SPATA17Q96L03 361 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 KATNB1Q9BVA0 655 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 SLC2A11Q9BYW1 496 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 FN3KQ9H479 309 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 LMAN1LQ9HAT1 526 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 FGF21Q9NSA1 209 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 FLRT3Q9NZU0 649 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 CACNG4Q9UBN1 327 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 MUTYHQ9UIF7 546 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 TMED3Q9Y3Q3 217 aa2.59□□□□□ -1.99
SCFD1-218ENST00000556256 TRIOBPQ9H2D6 2365 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 TRAV24A0A0B4J272 114 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 HTR3EA5X5Y0 456 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM86B1E9PN63 330 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 H0Y626 953 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 ARPC2O15144 300 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 RPN1P04843 607 aaKnown RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM86B2P0C5J1 330 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM58BPP0C7Q3 252 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 IRF2P14316 349 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 PDGFRAP16234 1089 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 ACAT1P24752 427 aaKnown RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 CD27P26842 260 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 VAMP7P51809 220 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 CAPZA1P52907 286 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 MAZP56270 477 aaKnown RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 PTENP60484 403 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 GPR17Q13304 367 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 HLA-BQ31612 363 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 C15orf32Q32M92 178 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 PDLIM3Q53GG5 364 aaPredicted RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 LBHQ53QV2 105 aaPredicted RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 ZRANB3Q5FWF4 1079 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM91A1Q658Y4 838 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 NOTUMQ6P988 496 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 C11orf57Q6ZUT1 292 aaPredicted RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 ANKRD33Q7Z3H0 272 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 MARCH9Q86YJ5 346 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM219AQ8IW50 185 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 OR8H3Q8N146 312 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 RAB42Q8N4Z0 105 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 RASGEF1AQ8N9B8 481 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 C17orf47Q8NEP4 570 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 OR10Q1Q8NGQ4 319 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 SETD6Q8TBK2 473 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 FAM71F1Q96KD3 344 aaPredicted RBP2.58□□□□□ -2
SCFD1-218ENST00000556256 GBP5Q96PP8 586 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 INTS14Q96SY0 518 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 KRT12Q99456 494 aa2.58□□□□□ -2
SCFD1-218ENST00000556256 INPP5KQ9BT40 448 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms