RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ADCK2Q7Z695 626 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 BPHLQ86WA6 291 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-218ENST00000555213 D2HGDHQ8N465 521 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 TBC1D19Q8N5T2 526 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 CCNYL1Q8N7R7 359 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 ANKS4BQ8N8V4 417 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 OR2A1Q8NGT9 310 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 OR8K5Q8NH50 307 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 OR56A3Q8NH54 315 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 FLVCR1-AS1Q8TAF5 88 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 ZNF483Q8TF39 744 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-218ENST00000555213 ZUFSPQ96AP4 578 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 PPM1MQ96MI6 270 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 TAAR9Q96RI9 348 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 ZPBPQ9BS86 351 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM79Q9BSE2 394 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 DDA1Q9BW61 102 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 SGPP1Q9BX95 441 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 B3GNT4Q9C0J1 378 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 CHRNA10Q9GZZ6 450 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 KLHL25Q9H0H3 589 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 IRAK4Q9NWZ3 460 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 SIDT1Q9NXL6 827 aaKnown RBP10.48□□□□□ -0.73
SHMT2-218ENST00000555213 KLHL14Q9P2G3 628 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 RARRES3Q9UL19 164 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 SNX7Q9UNH6 387 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 RAP2CQ9Y3L5 183 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 DYRK1BQ9Y463 629 aa10.48□□□□□ -0.73
SHMT2-218ENST00000555213 COL27A1Q8IZC6 1860 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 TRABD2BA6NFA1 517 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 E2F3O00716 465 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PRICKLE3O43900 615 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 STK16O75716 305 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 SUPT7LO94864 414 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 WDR47O94967 919 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 FGF4P08620 206 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 MSL3P1P0C860 447 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 EBLN1P0CF75 366 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 CCL4P13236 92 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 TSPAN8P19075 237 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 ITIH1P19827 911 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 EEF1DP29692 281 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 GRK3P35626 688 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 SERPINB5P36952 375 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 GRIA3P42263 894 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 MC2RQ01718 297 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 KCNAB1Q14722 419 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PTCHD3Q3KNS1 767 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 GKAP1Q5VSY0 366 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 KIAA1614Q5VZ46 1190 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 LRRC70Q7Z2Q7 622 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 THOC6Q86W42 341 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PPP1R3BQ86XI6 285 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 CRLF3Q8IUI8 442 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 WDR75Q8IWA0 830 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 LRRC56Q8IYG6 542 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 SNX31Q8N9S9 440 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PPP1R14CQ8TAE6 165 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PIWIL2Q8TC59 973 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PYCR2Q96C36 320 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 OR6C1Q96RD1 312 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 DPH7Q9BTV6 452 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 SHCBP1LQ9BZQ2 653 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 ILKAPQ9H0C8 392 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 NPHS2Q9NP85 383 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 FBXO8Q9NRD0 319 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 FGF21Q9NSA1 209 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 DNAJC11Q9NVH1 559 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PCTPQ9UKL6 214 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PLCL2Q9UPR0 1127 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PCDHGA7Q9Y5G6 932 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 KLK4Q9Y5K2 254 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 TNPO3Q9Y5L0 923 aaKnown RBP10.47□□□□□ -0.73
SHMT2-218ENST00000555213 KCNE2Q9Y6J6 123 aa10.47□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM150CB9EJG8 249 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 OR7A17O14581 309 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 BRINP1O60477 761 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 PRAMEF4O60810 478 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 HSPA4LO95757 839 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 KITP10721 976 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 FOLR1P15328 257 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 GNAZP19086 355 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 EPORP19235 508 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 CD82P27701 267 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 GDF5P43026 501 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 SLC6A12P48065 614 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 PIK3CGP48736 1102 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 IDH3AP50213 366 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.73
SHMT2-218ENST00000555213 CCR8P51685 355 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 ERVPABLB-1P60509 514 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 CLCQ05315 142 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 ASPHQ12797 758 aa10.46□□□□□ -0.73
SHMT2-218ENST00000555213 GPR19Q15760 415 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms