RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 PIBF1Q8WXW3 757 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 DPF1Q92782 380 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 DHTKD1Q96HY7 919 aaPredicted RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 PRMT6Q96LA8 375 aaPredicted RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 SIGLEC11Q96RL6 698 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 RASL10BQ96S79 203 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 CCNL2Q96S94 520 aaPredicted RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 TRIM62Q9BVG3 475 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 IQCGQ9H095 443 aaKnown RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 C8orf33Q9H7E9 229 aaPredicted RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 WDR76Q9H967 626 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 OR6C2Q9NZP2 312 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 CHMP5Q9NZZ3 219 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 PISDQ9UG56 409 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 PCDHA7Q9UN72 937 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 PACSIN2Q9UNF0 486 aaPredicted RBP3.65□□□□□ -1.82
KTN1-220ENST00000555172 CHMP2BQ9UQN3 213 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 ZNF510Q9Y2H8 683 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 PLEKHG2Q9H7P9 1386 aa3.65□□□□□ -1.82
KTN1-220ENST00000555172 A0A087X0K7 114 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TYW5A2RUC4 315 aaKnown RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 ANKRD30BLA7E2S9 258 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 A8MUI8 341 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 H3BMM5 538 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TEX46H3BTG2 121 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 PSMD3O43242 534 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 RNF13O43567 381 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 CLPXO76031 633 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TGM6O95932 706 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 MT-ND1P03886 318 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 AKR1A1P14550 325 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 U2AF2P26368 475 aaKnown RBP eCLIP3.65□□□□□ -1.832e-6■■□□□ 14.5
KTN1-220ENST00000555172 LHX1P48742 406 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 NLRP11P59045 1033 aaKnown RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 CBX1P83916 185 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 DGCR2P98153 550 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 COTL1Q14019 142 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 CMPK2Q5EBM0 449 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TTC23Q5W5X9 447 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 ASPHD2Q6ICH7 369 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TRILQ7L0X0 811 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 IRF2BP2Q7Z5L9 587 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 DTX2Q86UW9 622 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 TMPRSS12Q86WS5 348 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 SYCE1Q8N0S2 351 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 UBE2J2Q8N2K1 259 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 CPEB3Q8NE35 698 aaKnown RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 OR4N2Q8NGD1 307 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 OR9K2Q8NGE7 335 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 EXD1Q8NHP7 514 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 FAR1Q8WVX9 515 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 ERLEC1Q96DZ1 483 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 HMCESQ96FZ2 354 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 SFXN2Q96NB2 322 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 SNX18Q96RF0 628 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 NPY6RQ99463 290 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 SEPHS2Q99611 448 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 FAM110AQ9BQ89 295 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 ALKBH7Q9BT30 221 aaPredicted RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 TDRD1Q9BXT4 1180 aaKnown RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 SLC2A11Q9BYW1 496 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 ROPN1BQ9BZX4 212 aaPredicted RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 ZFP14Q9HCL3 533 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 MRPL47Q9HD33 250 aaKnown RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 TREM1Q9NP99 234 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 GPR108Q9NPR9 543 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 PHPT1Q9NRX4 125 aaPredicted RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 PLEKHB1Q9UF11 243 aaPredicted RBP3.65□□□□□ -1.83
KTN1-220ENST00000555172 KCNJ14Q9UNX9 436 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 MAST3O60307 1309 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 KIF16BQ96L93 1317 aa3.65□□□□□ -1.83
KTN1-220ENST00000555172 KIF27Q86VH2 1401 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 TMEM129A0AVI4 362 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TMEM221A6NGB7 291 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 A6NNC1 897 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 MARCH11A6NNE9 402 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 FAM157AC9JC47 383 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 YKT6O15498 198 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 NDUFS4O43181 175 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TMPRSS11DO60235 418 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 FAM20BO75063 409 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TOP3BO95985 862 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 IVLP07476 585 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ZNF18P17022 549 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ITGB6P18564 788 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 TPSB2P20231 275 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 ACRV1P26436 265 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 FCGR2BP31994 310 aaPredicted RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 CYP2C18P33260 490 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 EIF2S3P41091 472 aaKnown RBP3.64□□□□□ -1.83
KTN1-220ENST00000555172 IER3P46695 156 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 METAP2P50579 478 aaKnown RBP eCLIP3.64□□□□□ -1.83
KTN1-220ENST00000555172 CYP2J2P51589 502 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 CACNA2D1P54289 1103 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 NXPH1P58417 271 aa3.64□□□□□ -1.83
KTN1-220ENST00000555172 NANOS3P60323 173 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms