RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MYBPC1Q00872 1141 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 EMX2Q04743 252 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 PRKG2Q13237 762 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 NFYCQ13952 458 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 FXNQ16595 210 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ATP6AP1LQ52LC2 224 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 C6orf136Q5SQH8 315 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 C6orf52Q5T4I8 152 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 XKR5Q6UX68 686 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 CYP2R1Q6VVX0 501 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 PROSER1Q86XN7 944 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 NRROSQ86YC3 692 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 CPNE9Q8IYJ1 553 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 KIAA2013Q8IYS2 634 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 OXR1Q8N573 874 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 PDPRQ8NCN5 879 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 CANT1Q8WVQ1 401 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 TMEM125Q96AQ2 219 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 SH3GL3Q99963 347 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 SLC23A2Q9UGH3 650 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 OTCP00480 354 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 FASP25445 335 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 DIO3P55073 304 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 APOFQ13790 326 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 CRTC3Q6UUV7 619 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 FRA10AC1Q70Z53 315 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 CARM1Q86X55 608 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 PAPD5Q8NDF8 572 aaKnown RBP16.8■□□□□ 0.28
SHOX-204ENST00000554971 TRPV3Q8NET8 790 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ANKRD60Q9BZ19 345 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 TMEM9BQ9NQ34 198 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ZNHIT2Q9UHR6 403 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 TIMM22Q9Y584 194 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 PTGDR2Q9Y5Y4 395 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ARHGAP10A1A4S6 786 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 PRR19A6NJB7 356 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 C4orf47A7E2U8 309 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 GPR89AB7ZAQ6 455 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 DFNA5O60443 496 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 TNFP01375 233 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 ENO2P09104 434 aaPredicted RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 GPR89BP0CG08 455 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 ZNF883P0CG24 379 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 ATP1B2P14415 290 aaPredicted RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 ATP6V1B2P21281 511 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 AK4P27144 223 aaPredicted RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 HTR1EP28566 365 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 AGTR2P50052 363 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 CCT8P50990 548 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 BLKP51451 505 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 CDKL4Q5MAI5 379 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 TBCELQ5QJ74 424 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 PTRHD1Q6GMV3 140 aaKnown RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 DBX2Q6ZNG2 339 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 TRAPPC5Q8IUR0 188 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 CENPNQ96H22 339 aaPredicted RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 SLC39A3Q9BRY0 314 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 AGPAT4Q9NRZ5 378 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
SHOX-204ENST00000554971 TRNAU1APQ9NX07 287 aaKnown RBP16.79■□□□□ 0.28
SHOX-204ENST00000554971 A0A1B0GTL3 188 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 C7orf72A4D263 438 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 ZNF839A8K0R7 811 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 AQP9O43315 295 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 AKAP10O43572 662 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 PCDHGA12O60330 932 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 PLA2G5P39877 138 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 NSG1P42857 185 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 ZFP36L2P47974 494 aaKnown RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 TUBA4AP68366 448 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 CTBSQ01459 385 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 MAD2L1Q13257 205 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 MTX3Q5HYI7 312 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 THEMIS2Q5TEJ8 643 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 HMBOX1Q6NT76 420 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 TMEM220Q6QAJ8 160 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 CHST15Q7LFX5 561 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 ZFAND4Q86XD8 727 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 GPBAR1Q8TDU6 330 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 OR2M4Q96R27 311 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 SEMA6AQ9H2E6 1030 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 ALG2Q9H553 416 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 RMI1Q9H9A7 625 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 PTBP2Q9UKA9 531 aaKnown RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 GPSM3Q9Y4H4 160 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 OARD1Q9Y530 152 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 NCF1BA6NI72 391 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 NCF1CA8MVU1 366 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 OR4F21O95013 312 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 CD59P13987 128 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 NCF1P14598 390 aaPredicted RBP16.78■□□□□ 0.28
SHOX-204ENST00000554971 PRLHRP49683 370 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 NME5P56597 212 aa16.78■□□□□ 0.28
SHOX-204ENST00000554971 ERVPABLB-1P60509 514 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms