RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 F8VWA3 439 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 ATP6V0E1O15342 81 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 KERAO60938 352 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 CRCPO75575 148 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 AMBPP02760 352 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SBK2P0C263 348 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SP9P0CG40 484 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 IGHV4-31P0DP07 118 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 P4HA1P13674 534 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 LIFP15018 202 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 GOT1P17174 413 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 PIK3R1P27986 724 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 CEACAM8P31997 349 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 OR3A1P47881 315 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 NPBWR1P48145 328 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 MAZP56270 477 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 YBEYP58557 167 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 KLC1Q07866 573 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TRAP1Q12931 704 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 EXT1Q16394 746 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 RBBP7Q16576 425 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TWISTNBQ3B726 338 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 KBTBD12Q3ZCT8 623 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SLC35D3Q5M8T2 416 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 LYSMD4Q5XG99 296 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TTC27Q6P3X3 843 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 ALKBH5Q6P6C2 394 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 CEACAM20Q6UY09 585 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 RBMS3Q6XE24 437 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SLC16A9Q7RTY1 509 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 C4orf19Q8IY42 314 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 NDUFAF2Q8N183 169 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 STPG4Q8N801 248 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TRIM58Q8NG06 486 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 OR10V1Q8NGI7 309 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 OR4C3Q8NH37 302 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 OR52N5Q8NH56 324 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 UBLCP1Q8WVY7 318 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 WBP2Q969T9 261 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 FBXO17Q96EF6 278 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 AK8Q96MA6 479 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 CCDC43Q96MW1 224 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 OSBPL8Q9BZF1 889 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 ZNF350Q9GZX5 532 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 CUEDC2Q9H467 287 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 DBNDD1Q9H9R9 158 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TRPV4Q9HBA0 871 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 SIX2Q9NPC8 291 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 FGF21Q9NSA1 209 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 INTS9Q9NV88 658 aaKnown RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 ADPRHL2Q9NX46 363 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 TMEM161AQ9NX61 479 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 AKAP7Q9P0M2 348 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-213ENST00000554776 NSG2Q9Y328 171 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 KLK4Q9Y5K2 254 aa2.8□□□□□ -1.96
SCFD1-213ENST00000554776 A0A1W2PN81 502 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 C5orf51A6NDU8 294 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SMIM1B2RUZ4 78 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 BLOC1S5-TXNDC5H3BN57 136 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 NTN3O00634 580 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 EDIL3O43854 480 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ACSL4O60488 711 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 AKAP3O75969 853 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CAVIN2O95810 425 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 MOCS2O96007 188 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 APOHP02749 345 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 MT-ND3P03897 115 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PATE4P0C8F1 98 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ERVK-10P10266 1014 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CYP2A7P20853 494 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ALDH4A1P30038 563 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CTNNB1P35222 781 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CHRNA7P36544 502 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ALDH3A2P51648 485 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SNU13P55769 128 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 STX1BP61266 288 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CDR2Q01850 454 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SP3Q02447 781 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 CACNG1Q06432 222 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SULT2A1Q06520 285 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 IL10RBQ08334 325 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ABRQ12979 859 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 RPA4Q13156 261 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 GPR17Q13304 367 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 P2RY6Q15077 328 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 HFEQ30201 348 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 KRTAP27-1Q3LI81 207 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PRAMEF8Q5VWM4 474 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ARHGAP17Q68EM7 881 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 OR4C11Q6IEV9 310 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PLBD1Q6P4A8 553 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 SIGLEC15Q6ZMC9 328 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 C5orf24Q7Z6I8 188 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 PIGZQ86VD9 579 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 ANKRD46Q86W74 232 aa2.79□□□□□ -1.96
SCFD1-213ENST00000554776 MEX3DQ86XN8 651 aaKnown RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 APLFQ8IW19 511 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-213ENST00000554776 TDHQ8IZJ6 230 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms