RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MVB12AQ96EY5 273 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 RBM41Q96IZ5 413 aaKnown RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 LRGUKQ96M69 825 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF578Q96N58 590 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FCRL5Q96RD9 977 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ANP32EQ9BTT0 268 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 GSDMCQ9BYG8 508 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 CDH19Q9H159 772 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 GBA3Q9H227 469 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FAM83DQ9H4H8 585 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 PRORYQ9H606 182 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SUDS3Q9H7L9 328 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 C10orf88Q9H8K7 445 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 POLR1BQ9H9Y6 1135 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 GPR35Q9HC97 309 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 MAGEE1Q9HCI5 957 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 PKD2L2Q9NZM6 624 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 VPS18Q9P253 973 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 KLHL8Q9P2G9 620 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TRIM10Q9UDY6 481 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FAM153AQ9UHL3 310 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 MOSPD1Q9UJG1 213 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SHOC2Q9UQ13 582 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ITPR1Q14643 2758 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 BPTFQ12830 3046 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 MGAQ8IWI9 3026 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 hCG_2014768A0A024R1R8 64 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC151A5D8V7 595 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CDRT15L2A8MXV6 281 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 E7ENX8 843 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 APOC4-APOC2K7ER74 178 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 GAPDHSO14556 408 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 PPM1DO15297 605 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SLC16A6O15403 523 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 B4GAT1O43505 415 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 PMPCBO75439 489 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 EPOP01588 193 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 APOC2P02655 101 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ATP1A1P05023 1023 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ACP5P13686 325 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 HGFP14210 728 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF8P17098 575 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 RBL1P28749 1068 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ADRA1AP35348 466 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ETV5P41161 510 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ACTR1BP42025 376 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ABCG1P45844 678 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 FASLGP48023 281 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 OR1D5P58170 312 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 PROK1P58294 105 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ACTR1AP61163 376 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 UBE2IP63279 158 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 OTUD4Q01804 1114 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 TAP2Q03519 686 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CFHR1Q03591 330 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 TLE3Q04726 772 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC173Q0VFZ6 552 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 XRCC4Q13426 336 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 BOP1Q14137 746 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 C16orf72Q14CZ0 275 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CLPPQ16740 277 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 FAM153CQ494X1 144 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 MAP9Q49MG5 647 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ODF2Q5BJF6 829 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SIRPB2Q5JXA9 342 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 PDPK2PQ6A1A2 396 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM108Q6UXF1 575 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 BZW1Q7L1Q6 419 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 KDELC2Q7Z4H8 507 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ADGRG6Q86SQ4 1221 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC50Q8IVM0 306 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 CDKL3Q8IVW4 592 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 LSMEM2Q8N112 164 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ARL14Q8N4G2 192 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 Q8N9G6 341 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 GPR26Q8NDV2 337 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 IPMKQ8NFU5 416 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 WDR36Q8NI36 951 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ACTL9Q8TC94 416 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 KIAA1524Q8TCG1 905 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SLC37A2Q8TED4 501 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 HTR3CQ8WXA8 447 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 GLYATL1Q969I3 302 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SLC35A4Q96G79 324 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SPATA13Q96N96 652 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SLC46A1Q96NT5 459 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 VAT1Q99536 393 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
VTI1B-203ENST00000554636 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 NUDT22Q9BRQ3 303 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 DESI2Q9BSY9 194 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 SPATA16Q9BXB7 569 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 HEMGNQ9BXL5 484 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ADGRE3Q9BY15 652 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 OSBPL8Q9BZF1 889 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 GPR63Q9BZJ6 419 aa4.07□□□□□ -1.76
VTI1B-203ENST00000554636 ABCG4Q9H172 646 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms