RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CACNG3O60359 315 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CCNT2O60583 730 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CST8O60676 142 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 EIF1BO60739 113 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CRCPO75575 148 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 HEXIM1O94992 359 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 UNC5CO95185 931 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 APOA1P02647 267 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CELA2AP08217 269 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SNRNP70P08621 437 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 STSP08842 583 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GNAO1P09471 354 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 NR2F1P10589 423 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TXNP10599 105 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MLNP12872 115 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PRDX5P30044 214 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ADSSP30520 456 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SLC5A2P31639 672 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 EIF1P41567 113 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GRIA3P42263 894 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ACAA2P42765 397 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GRK6P43250 576 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SYKP43405 635 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 NAMPTP43490 491 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KIR3DL2P43630 455 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 YAP1P46937 504 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MTNR1BP49286 362 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CASP4P49662 377 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CCR9P51686 369 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PGDP52209 483 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SLC12A3P55017 1021 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 NR1H2P55055 460 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 AP1S1P61966 158 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PSMC6P62333 389 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 YWHAZP63104 245 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CREB5Q02930 508 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CREMQ03060 361 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 LIPEQ05469 1076 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TFCP2Q12800 502 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 STX5Q13190 355 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MED21Q13503 144 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ATP1A4Q13733 1029 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 POLD3Q15054 466 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CDK10Q15131 360 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KRT31Q15323 416 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TAF5Q15542 800 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SSX2Q16385 188 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CAMK4Q16566 473 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TMEM44Q2T9K0 475 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CD300EQ496F6 205 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 EPC2Q52LR7 807 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KLHL12Q53G59 568 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 LBHQ53QV2 105 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PRAMEF19Q5SWL8 479 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 UBAP2Q5T6F2 1119 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RIPPLY2Q5TAB7 128 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SULT1C3Q6IMI6 304 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 JMJD6Q6NYC1 403 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KLHL24Q6TFL4 600 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 VITQ6UXI7 678 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 HAUS6Q7Z4H7 955 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CAMKMTQ7Z624 323 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ANKS1BQ7Z6G8 1248 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF410Q86VK4 478 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 DHX40Q8IX18 779 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PDIK1LQ8N165 341 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CYP4Z2PQ8N1L4 340 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SLC43A2Q8N370 569 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SRBD1Q8N5C6 995 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 NECAB1Q8N987 351 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ENGASEQ8NFI3 743 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 OR13C3Q8NGS6 347 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RAB24Q969Q5 203 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CPNE4Q96A23 557 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 HMCESQ96FZ2 354 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GLT1D1Q96MS3 346 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 QRFPRQ96P65 431 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KRT12Q99456 494 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RBM4BQ9BQ04 359 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TUBB6Q9BUF5 446 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 KIFC1Q9BW19 673 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RBM4Q9BWF3 364 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 STRA6Q9BX79 667 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ZYG11BQ9C0D3 744 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF518BQ9C0D4 1074 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TINAGL1Q9GZM7 467 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RACGAP1Q9H0H5 632 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 BLZF1Q9H2G9 400 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms