RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ZNF512Q96ME7 567 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF347Q96SE7 839 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CIB1Q99828 191 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SH3GL1Q99961 368 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 NPLQ9BXD5 320 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 C1QTNF3Q9BXJ4 246 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 B3GNT5Q9BYG0 378 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RAB6CQ9H0N0 254 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 TFB2MQ9H5Q4 396 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 WDCPQ9H6R7 721 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 EPS8L2Q9H6S3 715 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RPF2Q9H7B2 306 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CAB39LQ9H9S4 337 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 BARX1Q9HBU1 254 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GLOD4Q9HC38 313 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SYTL2Q9HCH5 934 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 EMC7Q9NPA0 242 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ASAH2Q9NR71 780 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CHRAC1Q9NRG0 131 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SMOXQ9NWM0 555 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ZIM2Q9NZV7 527 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC167Q9P0B6 97 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OR12D3Q9UGF7 316 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 LEF1Q9UJU2 399 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PSME2Q9UL46 239 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CDH9Q9ULB4 789 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 INSL5Q9Y5Q6 135 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 COMMD10Q9Y6G5 202 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CHD6Q8TD26 2715 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ATRXP46100 2492 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 UBA6A0AVT1 1052 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC78A2IDD5 438 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 MYBPHLA2RUH7 354 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SLC38A8A6NNN8 435 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 H3BMQ9 156 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 GOLGA8TH3BQL2 631 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 STX16-NPEPL1H3BU86 382 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 STX16O14662 325 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 AZIN1O14977 448 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SYN3O14994 580 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SLC22A1O15245 554 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PHGDHO43175 533 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ATG13O75143 517 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 E2F6O75461 281 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CLPXO76031 633 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PRSS23O95084 383 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 WISP3O95389 354 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 MLYCDO95822 493 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 JCHAINP01591 159 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CDH1P12830 882 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 IL1RNP18510 177 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CDH3P22223 829 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 APEX1P27695 318 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ADRA1AP35348 466 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CCR2P41597 374 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SLC1A2P43004 574 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 LSSP48449 732 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SERPINH1P50454 418 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 NOVA1P51513 510 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 BCAP31P51572 246 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ALDH3A2P51648 485 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SUOXP51687 545 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CLCNKBP51801 687 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 TAS2R39P59534 338 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 IL2P60568 153 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 FCHO2Q0JRZ9 810 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 LCP2Q13094 533 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 NME3Q13232 169 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 KRR1Q13601 381 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PEX6Q13608 980 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RCAN2Q14206 197 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RAB39AQ14964 217 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 DHCR24Q15392 516 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 DLG2Q15700 870 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 TBR1Q16650 682 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 UPP1Q16831 310 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 KIF19Q2TAC6 998 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 FAM98BQ52LJ0 330 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF678Q5SXM1 525 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 TSTD2Q5T7W7 516 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 HMBOX1Q6NT76 420 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RANBP10Q6VN20 620 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 RNF165Q6ZSG1 346 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CLEC20AQ6ZU45 233 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 TFAP2DQ7Z6R9 452 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 FAM124AQ86V42 546 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 DDIASQ8IXT1 998 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ADGRG5Q8IZF4 528 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 MYO1HQ8N1T3 1032 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PYROXD2Q8N2H3 581 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 DPP10Q8N608 796 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 PCDH20Q8N6Y1 951 aaKnown RBP5.76□□□□□ -1.49
VPS33B-203ENST00000554264 SETD9Q8NE22 299 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF555Q8NEP9 628 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 GPR150Q8NGU9 434 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 AGR3Q8TD06 166 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CLEC4CQ8WTT0 213 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 CANT1Q8WVQ1 401 aa5.76□□□□□ -1.49
VPS33B-203ENST00000554264 NXNL1Q96CM4 212 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms