RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SOX11P35716 441 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SLC1A2P43004 574 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 GLRBP48167 497 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 EMP2P54851 167 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 RPS15AP62244 130 aaKnown RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 YBX1P67809 324 aaKnown RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 Q0VFX4 171 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SP140Q13342 867 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CTBP1Q13363 440 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CUL1Q13616 776 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 PTK6Q13882 451 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF169Q14929 603 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 HIF1AQ16665 826 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NDUFA9Q16795 377 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 WHAMMP3Q1A5X7 153 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 C4orf17Q53FE4 359 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 VWA2Q5GFL6 755 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 UGT3A1Q6NUS8 523 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 TMEM205Q6UW68 189 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SYT10Q6XYQ8 523 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SHISA6Q6ZSJ9 500 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 MAMDC2Q7Z304 686 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 PCGF5Q86SE9 256 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 GALNT7Q86SF2 657 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 KCNMB4Q86W47 210 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 PARP9Q8IXQ6 854 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 KBTBD2Q8IY47 623 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 AGGF1Q8N302 714 aaeCLIP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 DTWD1Q8N5C7 304 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 METTL27Q8N6F8 245 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NAT8LQ8N9F0 302 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 C2CD4AQ8NCU7 369 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 MNS1Q8NEH6 495 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 DNAJB14Q8TBM8 379 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CD200R1Q8TD46 325 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 FAR1Q8WVX9 515 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 FAM136AQ96C01 138 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 THAP11Q96EK4 314 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 C5orf34Q96MH7 638 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 GPR21Q99679 349 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NAT9Q9BTE0 207 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 AARSD1Q9BTE6 412 aaKnown RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 ACAT2Q9BWD1 397 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 RNF32Q9H0A6 362 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SYNPO2LQ9H987 977 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 FBXO6Q9NRD1 293 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 C20orf96Q9NUD7 363 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 TMEM184CQ9NVA4 438 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 RIC8BQ9NVN3 520 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 TRPC4Q9UBN4 977 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 PCYOX1Q9UHG3 505 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 ERRFI1Q9UJM3 462 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SLC5A6Q9Y289 635 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NTNG1Q9Y2I2 539 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CSAG2Q9Y5P2 127 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 DYTNA2CJ06 578 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 GOLGA8MH3BSY2 632 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 E2F3O00716 465 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 HAT1O14929 419 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 ZNF500O60304 480 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 ALOX12BO75342 701 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 KLHL18O94889 574 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 BMP10O95393 424 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 NSA2O95478 260 aaKnown RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 SYF2O95926 243 aaKnown RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 ANXA5P08758 320 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 PRR35P0CG20 571 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 ICAM2P13598 275 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 PGAM1P18669 254 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 AVPR1BP47901 424 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 RGS4P49798 205 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 PER3P56645 1201 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 MPP1Q00013 466 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 CDC16Q13042 620 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 CRYMQ14894 314 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 HKDC1Q2TB90 917 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 RNASEH2BQ5TBB1 312 aaKnown RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 KIAA0408Q6ZU52 694 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 UBE2R2Q712K3 238 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 MAATS1Q7Z4T9 603 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 ZC3H7AQ8IWR0 971 aaKnown RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 CNTN4Q8IWV2 1026 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 CPNE9Q8IYJ1 553 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 PPFIBP2Q8ND30 876 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 MCOLN3Q8TDD5 553 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 GRHL3Q8TE85 626 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 PSMF1Q92530 271 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 HAS2Q92819 552 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 C8orf44Q96CB5 159 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 MMABQ96EY8 250 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-203ENST00000554074 MS4A14Q96JA4 679 aa6.27□□□□□ -1.41
SLIRP-203ENST00000554074 CNDP1Q96KN2 507 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms