RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SERPINB9P50453 376 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 POU4F1Q01851 419 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 HSPA14Q0VDF9 509 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 CDC16Q13042 620 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 BOP1Q14137 746 aaKnown RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 SLC29A2Q14542 456 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 BRD3Q15059 726 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 RBM20Q5T481 1227 aaKnown RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 LGSNQ5TDP6 509 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 HECTD2Q5U5R9 776 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 AGAP7PQ5VUJ5 663 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 PRAMEF13Q5VWM6 474 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 MTFR2Q6P444 385 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 CCDC91Q7Z6B0 441 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 MRGPRGQ86SM5 289 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 GPR135Q8IZ08 494 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 MREGQ8N565 214 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 LILRA3Q8N6C8 439 aaPredicted RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 BCORP1Q8N888 145 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 ACVR1CQ8NER5 493 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 SPDYE1Q8NFV5 336 aaPredicted RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 OR4E2Q8NGC2 313 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 CD200R1Q8TD46 325 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 TFGQ92734 400 aaPredicted RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 C14orf79Q96F83 325 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 TSPAN17Q96FV3 270 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 RMDN2Q96LZ7 410 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 C12orf66Q96MD2 445 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 AGAP4Q96P64 663 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 LMF1Q96S06 567 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 GPR21Q99679 349 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 GPR22Q99680 433 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 WWP1Q9H0M0 922 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 EPB41L4BQ9H329 900 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 TFB2MQ9H5Q4 396 aaKnown RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 MVB12BQ9H7P6 319 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 SLC6A20Q9NP91 592 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 OLAHQ9NV23 265 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 TRMT6Q9UJA5 497 aaKnown RBP7.4□□□□□ -1.22
ABCD4-220ENST00000553998 CDYLQ9Y232 598 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 IKBKGQ9Y6K9 419 aa7.4□□□□□ -1.22
ABCD4-220ENST00000553998 ABCA2Q9BZC7 2435 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ANKRD12Q6UB98 2062 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 EXOC1LA0A1B0GW35 172 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CCDC151A5D8V7 595 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SOCS6O14544 535 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CTIFO43310 598 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 MAP3K7O43318 606 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 KDM1AO60341 852 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PIAS1O75925 651 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ALBP02768 609 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 RPN2P04844 631 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 F7P08709 466 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 NUDT17P0C025 328 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 MPC1LP0DKB6 136 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 COX6B1P14854 86 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CRABP2P29373 138 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PDHA2P29803 388 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CCNFP41002 786 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 MSH2P43246 934 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SLC12A2P55011 1212 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CDKN2DP55273 166 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 TAS2R39P59534 338 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PDAP1Q13442 181 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 USP10Q14694 798 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 EFTUD2Q15029 972 aaKnown RBP eCLIP7.39□□□□□ -1.238e-10■■■■□ 19.7
ABCD4-220ENST00000553998 RASA2Q15283 850 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ZKSCAN8Q15776 578 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 INAQ16352 499 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CYP2A13Q16696 494 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 UBAP2Q5T6F2 1119 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 DUS1LQ6P1R4 473 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 XKRXQ6PP77 449 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 FAM180AQ6UWF9 173 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 UNC5DQ6UXZ4 953 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 RPTNQ6XPR3 784 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PARP9Q8IXQ6 854 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 TBC1D21Q8IYX1 336 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ADGRF3Q8IZF5 1079 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 NKAPQ8N5F7 415 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ACBD4Q8NC06 268 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 MAGEC3Q8TD91 643 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 UBLCP1Q8WVY7 318 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 ANKRD7Q92527 254 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 CCDC120Q96HB5 630 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PDLIM5Q96HC4 596 aaKnown RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 FOPNLQ96NB1 174 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 PAFAH2Q99487 392 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 NDNQ99608 321 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SLC7A5P2Q9GIP4 190 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 LHPPQ9H008 270 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SLC26A1Q9H2B4 701 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SRMSQ9H3Y6 488 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 FAM60AQ9NP50 221 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 SLC22A11Q9NSA0 550 aa7.39□□□□□ -1.23
ABCD4-220ENST00000553998 IFT80Q9P2H3 777 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-220ENST00000553998 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms