RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 USP7Q93009 1102 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 C19orf60Q96EN9 201 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 TCTN2Q96GX1 697 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 TGM7Q96PF1 710 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ZFYVE21Q9BQ24 234 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SHCBP1LQ9BZQ2 653 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SYNDIG1Q9H7V2 258 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 NPHS2Q9NP85 383 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 MRGBPQ9NV56 204 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 MARCOQ9UEW3 520 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SH2B3Q9UQQ2 575 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 APOBEC2Q9Y235 224 aaKnown RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 RNF11Q9Y3C5 154 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SERTM1A2A2V5 107 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 ANKDD1BA6NHY2 528 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 D6RAR5 112 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 H7BY64 318 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SLC28A1O00337 649 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 FOXE1O00358 373 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 RGS14O43566 566 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SH3BP5O60239 455 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 CBFA2T3O75081 653 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SKAP2O75563 359 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 RFPL3O75679 317 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SLC35G6P0C7Q6 338 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 KITP10721 976 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 CD1CP29017 333 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 CSF2RBP32927 897 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 ARL4DP49703 201 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 PDCD2Q16342 344 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 IMPG1Q17R60 797 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 TMTC4Q5T4D3 741 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 CLEC6AQ6EIG7 209 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 FIGLAQ6QHK4 219 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 ACAD11Q709F0 780 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SPATA21Q7Z572 469 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 GLRX5Q86SX6 157 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 DCBLD1Q8N8Z6 715 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 TRPV3Q8NET8 790 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 OR7G3Q8NG95 312 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 METTL2AQ96IZ6 378 aaKnown RBP13.92□□□□□ -0.18
SHMT2-210ENST00000553950 PRAP1Q96NZ9 151 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 NLNQ9BYT8 704 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 FAM107BQ9H098 131 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 RHBGQ9H310 441 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 FANCEQ9HB96 536 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 PDE7BQ9NP56 450 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SOHLH2Q9NX45 425 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 SEMA5BQ9P283 1151 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF225Q9UK10 706 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 DNAJC15Q9Y5T4 150 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
SHMT2-210ENST00000553950 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 URADA6NGE7 173 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 MANBAO00462 879 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 PPP6CO00743 305 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 TXNDC9O14530 226 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 FFAR3O14843 346 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 GPR42O15529 346 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 B4GAT1O43505 415 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 CLEC3AO75596 197 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 PCNAP12004 261 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 PCSK2P16519 638 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 CD22P20273 847 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 DRD4P21917 467 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 SCTRP47872 440 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 SEC24CP53992 1094 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 GFERP55789 205 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 IRX1P78414 480 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 RGS1Q08116 209 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 RBBP5Q15291 538 aaKnown RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 GKAP1Q5VSY0 366 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 CACHD1Q5VU97 1274 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 FAM92BQ6ZTR7 304 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 PIP4P1Q86T03 277 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 TRIM73Q86UV7 250 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 WDR20Q8TBZ3 569 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 TRAPPC9Q96Q05 1148 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 KCNA7Q96RP8 456 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 NRTNQ99748 197 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF768Q9H5H4 540 aaKnown RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF395Q9H8N7 513 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 MEAF6Q9HAF1 191 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 PNPOQ9NVS9 261 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 ZFP69BQ9UJL9 534 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF490Q9ULM2 529 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-210ENST00000553950 BTRCQ9Y297 605 aa13.91□□□□□ -0.18
SHMT2-210ENST00000553950 A0A1B0GTL3 188 aa13.9□□□□□ -0.18
SHMT2-210ENST00000553950 TMEM233B4DJY2 109 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms