RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 GPATCH1Q9BRR8 931 aaKnown RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 DPH7Q9BTV6 452 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 RAB11FIP5Q9BXF6 653 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 DRC3Q9H069 523 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 DDX56Q9NY93 547 aaKnown RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 AAR2Q9Y312 384 aaKnown RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SONP18583 2426 aaKnown RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 CCDC162PA2VCL2 907 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 IQCF5A8MTL0 148 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ARHGEF33A8MVX0 844 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 PHF2O75151 1096 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 APOC2P02655 101 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 RPN2P04844 631 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 UQCRHP07919 91 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 INHBBP09529 407 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 OR56A5P0C7T3 313 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 TFEBP19484 476 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 MSNP26038 577 aaKnown RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 TRHRP34981 398 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 BDKRB1P46663 353 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 CSE1LP55060 971 aaKnown RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 RHAGQ02094 409 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 RELAQ04206 551 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ACVR1Q04771 509 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 GBX1Q14549 363 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 SEMA3AQ14563 771 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 EXT1Q16394 746 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ITPRIPL1Q6GPH6 555 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 TMEM211Q6ICI0 200 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ZNF534Q76KX8 674 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 CDC20BQ86Y33 519 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 POGLUT1Q8NBL1 392 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 STYXQ8WUJ0 223 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 RND1Q92730 232 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 CLEC4MQ9H2X3 399 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 TP63Q9H3D4 680 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 RUVBL2Q9Y230 463 aaKnown RBP8.52□□□□□ -1.05
PRKCH-208ENST00000553846 FAM215AQ9Y5M1 114 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 NFS1Q9Y697 457 aa8.52□□□□□ -1.05
PRKCH-208ENST00000553846 H0YIG0 161 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 PSTPIP1O43586 416 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 SUN1O94901 812 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 COMTP21964 271 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 DNASE1P24855 282 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 SLC1A1P43005 524 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 USP10Q14694 798 aaKnown RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 POU6F1Q14863 301 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 DEFB113Q30KQ7 82 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 KAZNQ674X7 775 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 RTL6Q6ICC9 239 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 VN1R4Q7Z5H5 301 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 CAMKMTQ7Z624 323 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 ZZZ3Q8IYH5 903 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 KATNAL2Q8IYT4 538 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 CLYBLQ8N0X4 340 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 KIF2BQ8N4N8 673 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 TAB3Q8N5C8 712 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 SLC5A8Q8N695 610 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 ZFP62Q8NB50 900 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 OR9A4Q8NGU2 314 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 ASZ1Q8WWH4 475 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 RMND5BQ96G75 393 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 COX4I2Q96KJ9 171 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 SPATA13Q96N96 652 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 CARD6Q9BX69 1037 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 KCNK13Q9HB14 408 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 LANCL2Q9NS86 450 aa8.51□□□□□ -1.05
PRKCH-208ENST00000553846 R3HDM2Q9Y2K5 976 aaKnown RBP8.51□□□□□ -1.05
PRKCH-208ENST00000553846 SOWAHDA6NJG2 315 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 HS6ST1O60243 411 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 NSA2O95478 260 aaKnown RBP8.5□□□□□ -1.05
PRKCH-208ENST00000553846 ANXA5P08758 320 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 ERVK-10P10266 1014 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 EZRP15311 586 aaKnown RBP8.5□□□□□ -1.05
PRKCH-208ENST00000553846 TPH1P17752 444 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 ADH7P40394 386 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 RFC3P40938 356 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 AGTR2P50052 363 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 HLCSP50747 726 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 MLF1P58340 268 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 SLC26A5P58743 744 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 OC90Q02509 493 aaPredicted RBP8.5□□□□□ -1.05
PRKCH-208ENST00000553846 PMPCAQ10713 525 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 PTK6Q13882 451 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 NAA25Q14CX7 972 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 IQCB1Q15051 598 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 MAPKAPK3Q16644 382 aa8.5□□□□□ -1.05
PRKCH-208ENST00000553846 PAPD4Q6PIY7 484 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms