RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 SEPHS1P49903 392 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 NEK2P51955 445 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 CSNK1G2P78368 415 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 PHEXP78562 749 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 REEP5Q00765 189 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 NR1D2Q14995 579 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 NAA25Q14CX7 972 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 TBCCQ15814 346 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 IMPG1Q17R60 797 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 GGTA1PQ4G0N0 100 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 CACHD1Q5VU97 1274 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 TMIGD1Q6UXZ0 262 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 FAM129CQ86XR2 697 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 KIAA2013Q8IYS2 634 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 L3MBTL4Q8NA19 623 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 ZNF740Q8NDX6 193 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 ABHD11Q8NFV4 315 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 RFWD2Q8NHY2 731 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 FLVCR1-AS1Q8TAF5 88 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 SELENOMQ8WWX9 145 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 UBE2E3Q969T4 207 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 REPS1Q96D71 796 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 GFM1Q96RP9 751 aaKnown RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 MTERF1Q99551 399 aaKnown RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 CDC6Q99741 560 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 NUF2Q9BZD4 464 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 SPNS1Q9H2V7 528 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 EHD1Q9H4M9 534 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 FARSBQ9NSD9 589 aaKnown RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 IRAK4Q9NWZ3 460 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 TMEM9Q9P0T7 183 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 ZNF490Q9ULM2 529 aaPredicted RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 PTGDR2Q9Y5Y4 395 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 ZFHX2Q9C0A1 2572 aaPredicted RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 KCNE1BA0A087WTH5 132 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 A0A0J9YVX5 310 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 GOLGA8QA0A0J9YX86 632 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 TRBC2A0A5B9 178 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 GOLGA8OA6NCC3 632 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 TLCD2A6NGC4 264 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 ANKDD1BA6NHY2 528 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 TRPC5OSA6NMA1 111 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 GOLGA8NF8WBI6 632 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 SLCO1B7G3V0H7 640 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 PIP5K1BO14986 540 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 HDAC3O15379 428 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 TNFSF14O43557 240 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 ULK1O75385 1050 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 FKBP9O95302 570 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 CPNE6O95741 557 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 PDYNP01213 254 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
CHD8-204ENST00000553622 ACP1P24666 158 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 CASP2P42575 452 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 HTR6P50406 440 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 HK2P52789 917 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 AQP5P55064 265 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 CFHR1Q03591 330 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 BTKQ06187 659 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 SPIDRQ14159 915 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 DEFB110Q30KQ9 67 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 PHF19Q5T6S3 580 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 FRG2Q64ET8 278 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 NXNQ6DKJ4 435 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 FCRL6Q6DN72 434 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 ADNP2Q6IQ32 1131 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 WDR74Q6RFH5 385 aaPredicted RBP9.37□□□□□ -0.91
CHD8-204ENST00000553622 PAQR7Q86WK9 346 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHD8-204ENST00000553622 RNF175Q8N4F7 328 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
CHD8-204ENST00000553622 DEFB124Q8NES8 71 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 N4BP2L2Q92802 583 aaPredicted RBP9.37□□□□□ -0.91
CHD8-204ENST00000553622 RERGQ96A58 199 aaPredicted RBP9.37□□□□□ -0.91
CHD8-204ENST00000553622 C19orf60Q96EN9 201 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 WDR34Q96EX3 536 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 FRG2BQ96QU4 278 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 CCT8L2Q96SF2 557 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 CD180Q99467 661 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 PFDN4Q9NQP4 134 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 VTI1BQ9UEU0 232 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 HAO1Q9UJM8 370 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 PCDHGA11Q9Y5H2 935 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 DNAJC15Q9Y5T4 150 aa9.37□□□□□ -0.91
CHD8-204ENST00000553622 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 PTPRZ1P23471 2315 aaPredicted RBP9.36□□□□□ -0.91
CHD8-204ENST00000553622 IGHV5-51A0A0C4DH38 117 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 ATP6AP2A0A1C7CYW4 349 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 A0A1W2PQM1 296 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 H0YIV9 168 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 NDUFAB1O14561 156 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 GFRA3O60609 400 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 ATP6AP2O75787 350 aa9.36□□□□□ -0.91
CHD8-204ENST00000553622 EIF2S1P05198 315 aaKnown RBP9.36□□□□□ -0.91
CHD8-204ENST00000553622 JUNP05412 331 aaKnown RBP9.36□□□□□ -0.91
CHD8-204ENST00000553622 FGF4P08620 206 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms