RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DNMT3LQ9UJW3 386 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 POU2F3Q9UKI9 436 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 FAM50BQ9Y247 325 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 SNX8Q9Y5X2 465 aa7.14□□□□□ -1.27
BEST3-212ENST00000553096 REV3LO60673 3130 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 A0A0U1RQS6 177 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 OR2A25A4D2G3 310 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 NCF1BA6NI72 391 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 METTL15A6NJ78 407 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 NCF1CA8MVU1 366 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 SCAMP3O14828 347 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 ST8SIA5O15466 376 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 MED26O95402 600 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 F11P03951 625 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CAPN1P07384 714 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SERPINF2P08697 491 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 APEHP13798 732 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 NCF1P14598 390 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 RAC2P15153 192 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CD36P16671 472 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CORO1AP31146 461 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 ATP5C1P36542 298 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 ARL1P40616 181 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 MAP2K4P45985 399 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 TTPAP49638 278 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 AGTR2P50052 363 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 DGKQP52824 942 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 YBEYP58557 167 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 ERVPABLB-1P60509 514 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 NCS1P62166 190 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 LSM3P62310 102 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 MRPS15P82914 257 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 ELAVL2Q12926 359 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 PROX2Q3B8N5 592 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 LRIT3Q3SXY7 679 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 TRIM60Q495X7 471 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CXorf57Q6NSI4 855 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 HS3ST5Q8IZT8 346 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 LILRB4Q8NHJ6 448 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SLC22A12Q96S37 553 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 RIBC2Q9H4K1 309 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 IFT22Q9H7X7 185 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 RC3H2Q9HBD1 1191 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 C1orf109Q9NX04 203 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 KLQ9UEF7 1012 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 RAPGEFL1Q9UHV5 662 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 NEUROG3Q9Y4Z2 214 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 PCDHB14Q9Y5E9 798 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 PCDHGA2Q9Y5H1 932 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 BACE2Q9Y5Z0 518 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ALPK3Q96L96 1907 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 NOTCH4Q99466 2003 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 PIKFYVEQ9Y2I7 2098 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ZBBXA8MT70 800 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 EVPLLA8MZ36 301 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 RAD51BO15315 384 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 MAN1A2O60476 641 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 WDR47O94967 919 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SNX4O95219 450 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 POP4O95707 220 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 FADS2O95864 444 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 SERPINA1P01009 418 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 IRF1P10914 325 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CR2P20023 1033 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 FPR1P21462 350 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ALDH4A1P30038 563 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CD6P30203 668 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 PRKAR1BP31321 381 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 FMO3P31513 532 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CASP3P42574 277 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CLCN4P51793 760 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ZNF140P52738 457 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 PLD1Q13393 1074 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SSPNQ14714 243 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 TAF1AQ15573 450 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 Q3ZCU0 254 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SETMARQ53H47 684 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 CPZQ66K79 652 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SLC39A5Q6ZMH5 540 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ANKRD33Q7Z3H0 272 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ADAMTSL2Q86TH1 951 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CALHM3Q86XJ0 350 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 SNX29P2Q8IUI4 249 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 ZDHHC21Q8IVQ6 265 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 TMEM132CQ8N3T6 1108 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 MDGA1Q8NFP4 955 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 CAPSLQ8WWF8 208 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 AUTS2Q8WXX7 1259 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 KCNJ9Q92806 393 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 LINGO1Q96FE5 620 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 C19orf43Q9BQ61 176 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 KLF16Q9BXK1 252 aaPredicted RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 C11orf49Q9H6J7 331 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 KCNN3Q9UGI6 736 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 VPS51Q9UID3 782 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 IKZF3Q9UKT9 509 aa7.13□□□□□ -1.27
BEST3-212ENST00000553096 AGO1Q9UL18 857 aaKnown RBP7.13□□□□□ -1.27
BEST3-212ENST00000553096 MKLN1Q9UL63 735 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms