RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 UFM1P61960 85 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ELF3P78545 371 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ELOCQ15369 112 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TCEA2Q15560 299 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SPIN4Q56A73 249 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TAF8Q7Z7C8 310 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 C11orf74Q86VG3 221 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TRIM48Q8IWZ4 208 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 DEFB107AQ8IZN7 70 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SDR16C5Q8N3Y7 309 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 GLB1L3Q8NCI6 653 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SLC22A18Q96BI1 424 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ROPN1LQ96C74 230 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SPDL1Q96EA4 605 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 C11orf24Q96F05 449 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 APIPQ96GX9 242 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 NRTNQ99748 197 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 LRRC61Q9BV99 259 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TWSG1Q9GZX9 223 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 MIR1-1HGQ9H1L0 117 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ACTL8Q9H568 366 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 XKR8Q9H6D3 395 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SLC52A3Q9NQ40 469 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 DMRT3Q9NQL9 472 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 PRAMEF33A0A0G2JMD5 474 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 A0A1W2PP18 115 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TNFRSF10AO00220 468 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 MRASO14807 208 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 VILLO15195 856 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 PDGFBP01127 241 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 VIPP01282 170 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 CHRM5P08912 532 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 BCKDHAP12694 445 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 CAPN3P20807 821 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 PSMB5P28074 263 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 GSTM2P28161 218 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ZFP36L2P47974 494 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 NME5P56597 212 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 NXPH1P58417 271 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 UBE2IP63279 158 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 REEP5Q00765 189 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ACSM2AQ08AH3 577 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 DMWDQ09019 674 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 DDX39BQ13838 428 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ZNF542PQ5EBM4 170 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 PRRT3Q5FWE3 981 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ACSM2BQ68CK6 577 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SCUBE1Q8IWY4 988 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 RBM12BQ8IXT5 1001 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 ULK2Q8IYT8 1036 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 LIX1Q8N485 282 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 AVL9Q8NBF6 648 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 TEX37Q96LM6 180 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SERPINI1Q99574 410 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 NPAS2Q99743 824 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SPNS1Q9H2V7 528 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 RHBGQ9H310 441 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SRMSQ9H3Y6 488 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 SIRT5Q9NXA8 310 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 CPNE7Q9UBL6 633 aa10.84□□□□□ -0.67
CACNB3-224ENST00000552812 RUVBL1Q9Y265 456 aaKnown RBP10.84□□□□□ -0.67
CACNB3-224ENST00000552812 A0A088AWK7 358 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 BCAT2O15382 392 aaPredicted RBP10.83□□□□□ -0.68
CACNB3-224ENST00000552812 MYO1DO94832 1006 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 TDGF1P13385 188 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 CMPK1P30085 196 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 AFF3P51826 1226 aaKnown RBP10.83□□□□□ -0.68
CACNB3-224ENST00000552812 CLDN8P56748 225 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 HNRNPKP61978 463 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNB3-224ENST00000552812 RPS13P62277 151 aaKnown RBP10.83□□□□□ -0.68
CACNB3-224ENST00000552812 TBL3Q12788 808 aaKnown RBP10.83□□□□□ -0.68
CACNB3-224ENST00000552812 PTGR1Q14914 329 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 KIR2DS3Q14952 304 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 ZNF423Q2M1K9 1284 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 VPS26BQ4G0F5 336 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 ADNP2Q6IQ32 1131 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 NOXRED1Q6NXP6 359 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 GALNT18Q6P9A2 607 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 CYB5D1Q6P9G0 228 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 LAYNQ6UX15 382 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 SLC9B2Q86UD5 537 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 GKN2Q86XP6 184 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 NAGSQ8N159 534 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 RNF175Q8N4F7 328 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 FAM13CQ8NE31 585 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 TTLQ8NG68 377 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 OR2L3Q8NG85 312 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 OR4E2Q8NGC2 313 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 APOLD1Q96LR9 279 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 ZBTB18Q99592 522 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 SARGQ9BW04 601 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 DPY30Q9C005 99 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 WDR41Q9HAD4 459 aa10.83□□□□□ -0.68
CACNB3-224ENST00000552812 MRPS30Q9NP92 439 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms