RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 FAM20CQ8IXL6 584 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SYTL1Q8IYJ3 562 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 NKAPQ8N5F7 415 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 LINC01555Q8NAE3 123 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MCOLN3Q8TDD5 553 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ANKRD49Q8WVL7 239 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SLC44A1Q8WWI5 657 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ALKBH8Q96BT7 664 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 NMD3Q96D46 503 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 NXPE2Q96DL1 559 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 RNF31Q96EP0 1072 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 VPS50Q96JG6 964 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PKP4Q99569 1192 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ACAT2Q9BWD1 397 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 RAB11FIP5Q9BXF6 653 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 C1orf21Q9H246 121 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 VPS11Q9H270 941 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 POLR1BQ9H9Y6 1135 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 HEY2Q9UBP5 337 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ADAMTS20P59510 1910 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 WDFY3Q8IZQ1 3526 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 C15orf38-AP3S2A0A0A6YYH1 394 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 TLCD2A6NGC4 264 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SLC9B1P1A6NJY1 282 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 GFYI3L273 518 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 CDC7O00311 574 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 MATN2O00339 956 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 BRINP1O60477 761 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 GUCA1CO95843 209 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SLC16A8O95907 504 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 HIST1H2AGP0C0S8 130 aaPredicted RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 UGT2B7P16662 529 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 HIST1H2ADP20671 130 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PSMB5P28074 263 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 RBMS1P29558 406 aaKnown RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 FOXK2Q01167 660 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 FASTKQ14296 549 aaKnown RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 CSHL1Q14406 222 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PDK3Q15120 406 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SF1Q15637 639 aaKnown RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PHKG1Q16816 387 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ANKS6Q68DC2 871 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SPESP1Q6UW49 350 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SUSD1Q6UWL2 747 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 FRA10AC1Q70Z53 315 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ARPINQ7Z6K5 226 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PATL1Q86TB9 770 aaKnown RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 OR2L8Q8NGY9 312 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 DLG3Q92796 817 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ABTB1Q969K4 478 aaPredicted RBP9.59□□□□□ -0.87
LETMD1-234ENST00000552645 MED8Q96G25 268 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 HIST1H2AHQ96KK5 128 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 OR2A14Q96R47 310 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 HIST1H2AJQ99878 128 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SIKE1Q9BRV8 207 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 H2AFJQ9BTM1 129 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 TRIM54Q9BYV2 358 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 KLHL4Q9C0H6 718 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 NRSN2Q9GZP1 204 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 RAB33BQ9H082 229 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ZNF696Q9H7X3 374 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PARVBQ9HBI1 364 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 POPDC3Q9HBV1 291 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 S100A14Q9HCY8 104 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 OCIAD1Q9NX40 245 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ARL15Q9NXU5 204 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SLC39A1Q9NY26 324 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 EPHA6Q9UF33 1036 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 TLK1Q9UKI8 766 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 IKZF3Q9UKT9 509 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 POMT2Q9UKY4 750 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 PDE10AQ9Y233 779 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 KLHL20Q9Y2M5 609 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 ASPMQ8IZT6 3477 aa9.59□□□□□ -0.87
LETMD1-234ENST00000552645 SPTBP11277 2137 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 hCG_2014768A0A024R1R8 64 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SH3PXD2BA1X283 911 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 FOXO6A8MYZ6 492 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 DENRO43583 198 aaKnown RBP9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SUPT3HO75486 399 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 KRT38O76015 456 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 PDE5AO76074 875 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 C1QTNF9P0C862 333 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SLC35E2BP0CK96 405 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 FGF3P11487 239 aaPredicted RBP9.58□□□□□ -0.88
LETMD1-234ENST00000552645 ALOX15P16050 662 aaPredicted RBP9.58□□□□□ -0.88
LETMD1-234ENST00000552645 TYK2P29597 1187 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 PEBP1P30086 187 aaKnown RBP9.58□□□□□ -0.88
LETMD1-234ENST00000552645 RPA3P35244 121 aaPredicted RBP9.58□□□□□ -0.88
LETMD1-234ENST00000552645 ETV5P41161 510 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 LSSP48449 732 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SERPINB9P50453 376 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 PNLIPRP1P54315 467 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SH3BP2P78314 561 aa9.58□□□□□ -0.88
LETMD1-234ENST00000552645 SP140Q13342 867 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms