RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TUBA3CQ13748 450 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 MEP1AQ16819 746 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 MINDY4Q4G0A6 757 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 ICE2Q659A1 982 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 TUBA3EQ6PEY2 450 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 SUSD1Q6UWL2 747 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 CPEB2Q7Z5Q1 589 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 ADCK2Q7Z695 626 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 SDCCAG8Q86SQ7 713 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 EID3Q8N140 333 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 TMEM178AQ8NBL3 297 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 FAM98AQ8NCA5 519 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 MCOLN3Q8TDD5 553 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 EBNA1BP2Q99848 306 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 FRMD8P1Q9BZ68 369 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 VN1R1Q9GZP7 353 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 KCNK13Q9HB14 408 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 RAB6BQ9NRW1 208 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 TAC3Q9UHF0 121 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 PCYOX1Q9UHG3 505 aa13.42□□□□□ -0.26
CHMP1A-210ENST00000551981 IGKV1-8A0A0C4DH67 115 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 NPIPA5E9PKD4 350 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 H0YIG0 161 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 MYO1CO00159 1063 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 ABOP16442 354 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 KIR3DL1P43629 444 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 PNLIPRP1P54315 467 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 ABATP80404 500 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 TLE4Q04727 773 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 PTK6Q13882 451 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 TESK1Q15569 626 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 OR1C1Q15619 314 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 EXT1Q16394 746 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 CTSL3PQ5NE16 218 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 RNF187Q5TA31 235 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 ZNF425Q6IV72 752 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 MRNIPQ6NTE8 343 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 H3F3CQ6NXT2 135 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 ARHGEF39Q8N4T4 335 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 MDS2Q8NDY4 140 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 ATG4AQ8WYN0 398 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 CYTH2Q99418 400 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 TSPAN10Q9H1Z9 355 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 SYNPO2LQ9H987 977 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 MCCC2Q9HCC0 563 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 KLHL1Q9NR64 748 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 NPIPA1Q9UND3 350 aa13.41□□□□□ -0.26
CHMP1A-210ENST00000551981 GTF3C1Q12789 2109 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 IGHV3-20A0A0C4DH32 117 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 ASPDHA6ND91 283 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 SOWAHDA6NJG2 315 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 ARHGEF33A8MVX0 844 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 FANCGO15287 622 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 WISP2O76076 250 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 ESR1P03372 595 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 CHRM3P20309 590 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 FMO4P31512 558 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 AGTR2P50052 363 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 EFNA3P52797 238 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 SESN2P58004 480 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 KRTAP10-9P60411 292 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 CDSNQ15517 529 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 MEI1Q5TIA1 1274 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 FCRLBQ6BAA4 426 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 LANCL3Q6ZV70 420 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 CRLF3Q8IUI8 442 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 GHDCQ8N2G8 530 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 SLC5A8Q8N695 610 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 RNF214Q8ND24 703 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 OR9A4Q8NGU2 314 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 PHF10Q8WUB8 498 aaKnown RBP13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 SCMH1Q96GD3 660 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 BIRC8Q96P09 236 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 PANX2Q96RD6 677 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 IL22Q9GZX6 179 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 LACRTQ9GZZ8 138 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 TSPY26PQ9H489 355 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 PACSIN2Q9UNF0 486 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
CHMP1A-210ENST00000551981 AP3B1O00203 1094 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 PRRG2O14669 202 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 HAT1O14929 419 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 P2RX6O15547 441 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 ASNA1O43681 348 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 LIASO43766 372 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 NIPSNAP2O75323 286 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 TSPAN12O95859 305 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 CD96P40200 585 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 XCR1P46094 333 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms