RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CXCR2P25025 360 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GCAP28676 217 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 DLSTP36957 453 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GMPRP36959 345 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 HSD17B3P37058 310 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GDF5P43026 501 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 MAGEA12P43365 314 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GLRBP48167 497 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 ARF3P61204 181 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 RPS15AP62244 130 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 RPS15P62841 145 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 CSNK1G2P78368 415 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 DCDP81605 110 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 IRF9Q00978 393 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 SRSF1Q07955 248 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 VAC14Q08AM6 782 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 TSNAXIP1Q2TAA8 658 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 FRMPD2BQ6IN97 320 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 RHBDD2Q6NTF9 364 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 FAM199XQ6PEV8 388 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 RNF44Q7L0R7 432 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 CENPLQ8N0S6 344 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 OR4N4Q8N0Y3 316 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 ABHD11Q8NFV4 315 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 SLC5A11Q8WWX8 675 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 SCYL1Q96KG9 808 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 ZNF285Q96NJ3 590 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 OR2A5Q96R48 311 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 OR4K3Q96R72 315 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 ATOH8Q96SQ7 321 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 NLNQ9BYT8 704 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 FAM117AQ9C073 453 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 ENAMQ9NRM1 1142 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 STARD5Q9NSY2 213 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 PCMTD2Q9NV79 361 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 CUEDC1Q9NWM3 386 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 NUDT4Q9NZJ9 180 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 PSMC3IPQ9P2W1 217 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 TBK1Q9UHD2 729 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 METRNQ9UJH8 293 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 PTBP2Q9UKA9 531 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 FARSAQ9Y285 508 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 HEMK1Q9Y5R4 338 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 FITM1A5D6W6 292 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 SUPT3HB4E1H0 165 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 C21orf140B9A014 251 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CLGNO14967 610 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CCNT2O60583 730 aaKnown RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 KATNA1O75449 491 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 SUPT3HO75486 399 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 RFPL1O75677 317 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 SHBGP04278 402 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CTSBP07858 339 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CDH1P12830 882 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 LIFP15018 202 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 RORAP35398 523 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 STAT5AP42229 794 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 SLC6A12P48065 614 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 HSPA7P48741 367 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 EMP3P54852 163 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 MC1RQ01726 317 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 IFFO1Q0D2I5 559 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 GPS2Q13227 327 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 C18orf21Q32NC0 220 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CATSPEREQ5SY80 951 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 NXPE4Q6UWF7 544 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 ZNF517Q6ZMY9 492 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 TTLL10Q6ZVT0 673 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 VASH2Q86V25 355 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 PLD3Q8IV08 490 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 KLHDC8AQ8IYD2 350 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 DSELQ8IZU8 1212 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 PLD6Q8N2A8 252 aaKnown RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CSNK1A1LQ8N752 337 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 PDPRQ8NCN5 879 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 OR4K1Q8NGD4 311 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 PROKR1Q8TCW9 393 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 ACMSDQ8TDX5 336 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 AENQ8WTP8 325 aaKnown RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 TTC9Q92623 222 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 EXT2Q93063 718 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CAVIN3Q969G5 261 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 NEIL2Q969S2 332 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 ESAMQ96AP7 390 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 GPR78Q96P69 363 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 C17orf62Q9BQA9 187 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CD244Q9BZW8 370 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 TRIM4Q9C037 500 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CHST8Q9H2A9 424 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 AKIRIN1Q9H9L7 192 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 CUTCQ9NTM9 273 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 DNAJC11Q9NVH1 559 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 GPRC5BQ9NZH0 403 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 DHCR7Q9UBM7 475 aaKnown RBP10.15□□□□□ -0.78
PTCH1-225ENST00000551845 NDOR1Q9UHB4 597 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 IL17BQ9UHF5 180 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 DCDC2Q9UHG0 476 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms