RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GDAP1L1Q96MZ0 367 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 IL12RB2Q99665 862 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 NCAPGQ9BPX3 1015 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 WRAP53Q9BUR4 548 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SLC17A9Q9BYT1 436 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 NAT10Q9H0A0 1025 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 ZWILCHQ9H900 591 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 USP29Q9HBJ7 922 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 NOD2Q9HC29 1040 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 UBA2Q9UBT2 640 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 IPO11Q9UI26 975 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 PPIL1Q9Y3C6 166 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SPTBP11277 2137 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 UTP20O75691 2785 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 NUP210LQ5VU65 1888 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 A0A1W2PQM1 296 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 A6NCN8 305 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 RHPN2P1A8MT19 583 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 EIF3CLB5ME19 914 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 SCAMP1O15126 338 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TNFSF14O43557 240 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 RNF8O76064 485 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 HEXIM1O94992 359 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PGLSO95336 258 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 POP4O95707 220 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 EML2O95834 649 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 IGSF6O95976 241 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ALPIP09923 528 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 MYBL1P10243 752 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TGM2P21980 687 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TRIM23P36406 574 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 GARSP41250 739 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 CDKN2BP42772 138 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 GRK6P43250 576 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF75DP51815 510 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 CDH6P55285 790 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 SNX16P57768 344 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 RHOAP61586 193 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 SNRPD1P62314 119 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 RPS21P63220 83 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PPIDQ08752 370 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 CLCA4Q14CN2 919 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 E2F5Q15329 346 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ARL13BQ3SXY8 428 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ANKRD20A8PQ5CZ79 823 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 CCDC122Q5T0U0 273 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 FAM46CQ5VWP2 391 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 AADACL2Q6P093 401 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 GUSBP11Q6P575 273 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 IL27RAQ6UWB1 636 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 MFSD7Q6UXD7 560 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 MACC1Q6ZN28 852 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PTAR1Q7Z6K3 402 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 DSG4Q86SJ6 1040 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 VPS36Q86VN1 386 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 HSPH1Q92598 858 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 RAB7BQ96AH8 199 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ZBTB9Q96C00 473 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 HDAC11Q96DB2 347 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 CNDP2Q96KP4 475 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TSGA13Q96PP4 275 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 NUDCD1Q96RS6 583 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 EIF3CQ99613 913 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF670Q9BS34 389 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TDRD1Q9BXT4 1180 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TSPY26PQ9H489 355 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 ASCL3Q9NQ33 180 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 MRPL40Q9NQ50 206 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 GDF3Q9NR23 364 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 TRIM10Q9UDY6 481 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 OR1A2Q9Y585 309 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 SCINQ9Y6U3 715 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PRRC2CQ9Y520 2896 aaKnown RBP4.8□□□□□ -1.64
SCAF11-214ENST00000550893 MYO18BQ8IUG5 2567 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 PCM1Q15154 2024 aa4.8□□□□□ -1.64
SCAF11-214ENST00000550893 hCG_1818297A0A087WSY0 165 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF487B1APH4 448 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 DFFAO00273 331 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 NTN3O00634 580 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-214ENST00000550893 ADAM10O14672 748 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 FFAR2O15552 330 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 PRAMEF2O60811 474 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 RNASEH1O60930 286 aaKnown RBP4.79□□□□□ -1.64
SCAF11-214ENST00000550893 SOCS5O75159 536 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 RECQL5O94762 991 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-214ENST00000550893 TMEM225BP0DP42 221 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 CKMT1AP12532 417 aa4.79□□□□□ -1.64
SCAF11-214ENST00000550893 TSHRP16473 764 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms