RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 DYTNA2CJ06 578 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 KRT87PA6NCN2 255 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 ZNF839A8K0R7 811 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 ESPNB1AK53 854 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 MYO1CO00159 1063 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 LRRTM2O43300 516 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 NRP2O60462 931 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 KLHL18O94889 574 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 CCNDBP1O95273 360 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 EIF2S1P05198 315 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 SERPINA7P05543 415 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 STSP08842 583 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 ZSCAN5DPP0CG00 497 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 COX6A1P12074 109 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 EZRP15311 586 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 OGNP20774 298 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 FBLP22087 321 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 NMBRP28336 390 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 SOX11P35716 441 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 HSD17B2P37059 387 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 EIF3BP55884 814 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 SESN2P58004 480 aaPredicted RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 CRADDP78560 199 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 BASP1P80723 227 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 CDK16Q00536 496 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 RELAQ04206 551 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 SNX1Q13596 522 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 ZXDCQ2QGD7 858 aaPredicted RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 KRTAP21-3Q3LHN1 58 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 ANKRD20A4Q4UJ75 823 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 GARNL3Q5VVW2 1013 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 SP5Q6BEB4 398 aaPredicted RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 ZNF425Q6IV72 752 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 FBXO42Q6P3S6 717 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 CNSTQ6PJW8 725 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 LINC00696Q6ZRV3 163 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 NDUFAF7Q7L592 441 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 OR4N4Q8N0Y3 316 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 CSNK1A1LQ8N752 337 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 OR9A1PQ8NGU1 263 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 SMPDL3AQ92484 453 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 PSMF1Q92530 271 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 LPGAT1Q92604 370 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 CABS1Q96KC9 395 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 BIRC8Q96P09 236 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 TCF12Q99081 682 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 PLCD4Q9BRC7 762 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 DPH7Q9BTV6 452 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 TGIF2Q9GZN2 237 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 RBSNQ9H1K0 784 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 GPAMQ9HCL2 828 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 FAM114A2Q9NRY5 505 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 OLAHQ9NV23 265 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 RIC8BQ9NVN3 520 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 UTP6Q9NYH9 597 aaKnown RBP7.25□□□□□ -1.25
NEK3-201ENST00000550331 ITGB1BP2Q9UKP3 347 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 OSGIN2Q9Y236 505 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 MYO7BQ6PIF6 2116 aa7.25□□□□□ -1.25
NEK3-201ENST00000550331 DNHD1Q96M86 4753 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 LOC102723996A0A087X1L8 192 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 IGHV1-45A0A0A0MS14 117 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 TRAV17A0A0B4J275 112 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ARHGEF33A8MVX0 844 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 IDSB3KWA1 339 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 PRSS44E7EML9 344 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 H0YGG7 62 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 TXNDC9O14530 226 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 NIPSNAP2O75323 286 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 PSIP1O75475 530 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 JRKO75564 520 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 VAPBO95292 243 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 BMP10O95393 424 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 CATP04040 527 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 PRR35P0CG20 571 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 PKMP14618 531 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 TPSB2P20231 275 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 CHRM3P20309 590 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 CXCR2P25025 360 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 RPA3P35244 121 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 SLC26A3P40879 764 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 TNFSF10P50591 281 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 EMP2P54851 167 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ARF3P61204 181 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 AP2B1P63010 937 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ARG2P78540 354 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 PRDX1Q06830 199 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 FASTKQ14296 549 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 RPS6KA1Q15418 735 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 TPSAB1Q15661 275 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ZRSR2Q15696 482 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 VWA2Q5GFL6 755 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 MEI1Q5TIA1 1274 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ICE2Q659A1 982 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ZNF324BQ6AW86 544 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 KIAA0930Q6ICG6 404 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 LRRC8BQ6P9F7 803 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms