RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SPNS1Q9H2V7 528 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 TMEM216Q9P0N5 145 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 XPR1Q9UBH6 696 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 PLAAQ9Y263 795 aa21.53■■□□□ 1.04
BRF1-216ENST00000550208 ANKRD11Q6UB99 2663 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 HYKKA2RU49 373 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 FITM1A5D6W6 292 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 STATHP02808 62 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 KLK3P07288 261 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 GFAPP14136 432 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 LIFP15018 202 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 KRT15P19012 456 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 WT1P19544 449 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 ALAS2P22557 587 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 F8A1P23610 371 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 VARSP26640 1264 aaKnown RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 BCL6P41182 706 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 RPS15AP62244 130 aaKnown RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 CDC16Q13042 620 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 PRTGQ2VWP7 1150 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 C16orf46Q6P387 395 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 SH2D5Q6ZV89 423 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 CNPY4Q8N129 248 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 TTC29Q8NA56 475 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 CT55Q8WUE5 264 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 MRPL57Q9BQC6 102 aaKnown RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 ROPN1BQ9BZX4 212 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 CHST8Q9H2A9 424 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 ROPN1Q9HAT0 212 aaPredicted RBP21.52■■□□□ 1.04
BRF1-216ENST00000550208 PELI2Q9HAT8 420 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 CROTQ9UKG9 612 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 SEC16AO15027 2179 aa21.52■■□□□ 1.04
BRF1-216ENST00000550208 KCNE1BA0A087WTH5 132 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 LRRC14BA6NHZ5 514 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 MED26O95402 600 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 SBK3P0C264 359 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 ATXN8OSP0DMR3 200 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 C1GALT1C1LP0DN25 315 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 GNAZP19086 355 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 TCN2P20062 427 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 GRK3P35626 688 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 ARSFP54793 590 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 ALDH18A1P54886 795 aaKnown RBP21.51■■□□□ 1.03
BRF1-216ENST00000550208 SETDB1Q15047 1291 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 HKDC1Q2TB90 917 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 ZNF385CQ66K41 422 aaPredicted RBP21.51■■□□□ 1.03
BRF1-216ENST00000550208 SLCO4C1Q6ZQN7 724 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 TTLL10Q6ZVT0 673 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 VN1R4Q7Z5H5 301 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 TMPRSS11BQ86T26 416 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 CSNK1A1LQ8N752 337 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 MFSD9Q8NBP5 474 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 UBTD2Q8WUN7 234 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 RERGQ96A58 199 aaPredicted RBP21.51■■□□□ 1.03
BRF1-216ENST00000550208 THAP11Q96EK4 314 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 CRELD1Q96HD1 420 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 RUFY1Q96T51 708 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 MACROD1Q9BQ69 325 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 CAPS2Q9BXY5 557 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 MRPL46Q9H2W6 279 aaKnown RBP21.51■■□□□ 1.03
BRF1-216ENST00000550208 CPNE5Q9HCH3 593 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 CUTCQ9NTM9 273 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 GPRC5BQ9NZH0 403 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 IL17BQ9UHF5 180 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 SRPK3Q9UPE1 567 aa21.51■■□□□ 1.03
BRF1-216ENST00000550208 TRBC2A0A5B9 178 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 TK2O00142 265 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 P2RX6O15547 441 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 OR1F1O43749 312 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 PRAMEF4O60810 478 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 H2AFYO75367 372 aaKnown RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 EPORP19235 508 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 DLSTP36957 453 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 PDK4Q16654 411 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 FAM214AQ32MH5 1076 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 YOD1Q5VVQ6 348 aaPredicted RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 PRAMEF9Q5VWM5 478 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 ZNF517Q6ZMY9 492 aaPredicted RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 DTWD1Q8N5C7 304 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 PTGR2Q8N8N7 351 aaPredicted RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 TM4SF19Q96DZ7 209 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 GBP5Q96PP8 586 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 AIF1LQ9BQI0 150 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 SARGQ9BW04 601 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 GPN2Q9H9Y4 310 aaPredicted RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 TXLNGQ9NUQ3 528 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 NDOR1Q9UHB4 597 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 DCDC2Q9UHG0 476 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 RUVBL1Q9Y265 456 aaKnown RBP21.5■■□□□ 1.03
BRF1-216ENST00000550208 PCDHGA4Q9Y5G9 962 aa21.5■■□□□ 1.03
BRF1-216ENST00000550208 USP24Q9UPU5 2620 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 K7EPI3 171 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 TERTO14746 1132 aaKnown RBP21.49■■□□□ 1.03
BRF1-216ENST00000550208 CLGNO14967 610 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 AGXTP21549 392 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 REEP5Q00765 189 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 ATG9BQ674R7 924 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 CCDC81Q6ZN84 652 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 LRRC70Q7Z2Q7 622 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 PROKR1Q8TCW9 393 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms