RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 NXPE4Q6UWF7 544 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 ZNF517Q6ZMY9 492 aaPredicted RBP18.5■□□□□ 0.55
DDX54-207ENST00000550016 CCDC81Q6ZN84 652 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 LCA5Q86VQ0 697 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 MREGQ8N565 214 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 EPS8L3Q8TE67 593 aaKnown RBP18.5■□□□□ 0.55
DDX54-207ENST00000550016 CT55Q8WUE5 264 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 MR1Q95460 341 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 ESAMQ96AP7 390 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 PELI2Q9HAT8 420 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 DNAJC11Q9NVH1 559 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 CROTQ9UKG9 612 aa18.5■□□□□ 0.55
DDX54-207ENST00000550016 FEZF1A0PJY2 475 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 HYKKA2RU49 373 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 SMIM23A6NLE4 172 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 TXNDC9O14530 226 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CDH16O75309 829 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 TCN2P20062 427 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 AGXTP21549 392 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 DLSTP36957 453 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 EMP3P54852 163 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CDC16Q13042 620 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 PRTGQ2VWP7 1150 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 FAM199XQ6PEV8 388 aaPredicted RBP18.49■□□□□ 0.55
DDX54-207ENST00000550016 C19orf48Q6RUI8 117 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 TBC1D19Q8N5T2 526 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CSNK1A1LQ8N752 337 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 SNX31Q8N9S9 440 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 OR2W6PQ8NHA6 318 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 PROKR1Q8TCW9 393 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 UBTD2Q8WUN7 234 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 MRPL57Q9BQC6 102 aaKnown RBP18.49■□□□□ 0.55
DDX54-207ENST00000550016 SARGQ9BW04 601 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CHST8Q9H2A9 424 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 SYNPO2LQ9H987 977 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CPNE5Q9HCH3 593 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 CUTCQ9NTM9 273 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 GPRC5BQ9NZH0 403 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 DHCR7Q9UBM7 475 aaKnown RBP18.49■□□□□ 0.55
DDX54-207ENST00000550016 TMCO1Q9UM00 188 aa18.49■□□□□ 0.55
DDX54-207ENST00000550016 A0A1W2PPM1 405 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 TRBC2A0A5B9 178 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 C21orf140B9A014 251 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 GOLGA8RI6L899 631 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 TERTO14746 1132 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 CLGNO14967 610 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 DSCR3O14972 297 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 KLK8O60259 260 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 LCMT2O60294 686 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 CCNT2O60583 730 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 H2AFYO75367 372 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 C1GALT1C1LP0DN25 315 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 PYGBP11216 843 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 GFAPP14136 432 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 ALAS2P22557 587 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 BCL6P41182 706 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 AGTR2P50052 363 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 ALDH18A1P54886 795 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 MEF2AQ02078 507 aaPredicted RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 VAC14Q08AM6 782 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 IFFO1Q0D2I5 559 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 DNASE1L3Q13609 305 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 SETDB1Q15047 1291 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 PFKFB4Q16877 469 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 C1orf189Q5VU69 101 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 ZNF385CQ66K41 422 aaPredicted RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 SLCO4C1Q6ZQN7 724 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 TTLL10Q6ZVT0 673 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 LRRC70Q7Z2Q7 622 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 TMPRSS11BQ86T26 416 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 CYP4X1Q8N118 509 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 ZSCAN1Q8NBB4 408 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 MFSD9Q8NBP5 474 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 GBP5Q96PP8 586 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 AIF1LQ9BQI0 150 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 NLNQ9BYT8 704 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 CPSF2Q9P2I0 782 aaKnown RBP18.48■□□□□ 0.55
DDX54-207ENST00000550016 KCND3Q9UK17 655 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 PCDHGA4Q9Y5G9 962 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 CELSR3Q9NYQ7 3312 aa18.48■□□□□ 0.55
DDX54-207ENST00000550016 ZFHX4Q86UP3 3567 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 TLDC2A0PJX2 215 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 K7ENP7 123 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 OR1F1O43749 312 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 GSTA1P08263 222 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 KRT15P19012 456 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 WT1P19544 449 aaPredicted RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 F8A1P23610 371 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 DCDP81605 110 aaKnown RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 PDK4Q16654 411 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 COL28A1Q2UY09 1125 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 ATG9BQ674R7 924 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 LCN10Q6JVE6 187 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 INO80CQ6PI98 192 aaPredicted RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 RIBC1Q8N443 379 aaPredicted RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 ZNF740Q8NDX6 193 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 SLC45A3Q96JT2 553 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 GPR87Q9BY21 358 aa18.47■□□□□ 0.55
DDX54-207ENST00000550016 ROPN1BQ9BZX4 212 aaPredicted RBP18.47■□□□□ 0.55
DDX54-207ENST00000550016 FAM117AQ9C073 453 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms