RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 COX7A2P14406 83 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 C21orf58P58505 322 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 SRSF11Q05519 484 aaKnown RBP18.43■□□□□ 0.54
BRF1-215ENST00000549655 TMEM92Q6UXU6 159 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 MSANTD1Q6ZTZ1 278 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 ERMP1Q7Z2K6 904 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 TMEM132CQ8N3T6 1108 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 DTWD1Q8N5C7 304 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 OR2T12Q8NG77 320 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 BTBD9Q96Q07 612 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 FERD3LQ96RJ6 166 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 REXO4Q9GZR2 422 aaKnown RBP18.43■□□□□ 0.54
BRF1-215ENST00000549655 TAC3Q9UHF0 121 aa18.43■□□□□ 0.54
BRF1-215ENST00000549655 TGFB1P01137 390 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 GSNP06396 782 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 NDUFV2P19404 249 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 POU3F3P20264 500 aaPredicted RBP18.42■□□□□ 0.54
BRF1-215ENST00000549655 CDKN2CP42773 168 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 ASMTP46597 345 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 MLF2Q15773 248 aaPredicted RBP18.42■□□□□ 0.54
BRF1-215ENST00000549655 MTX3Q5HYI7 312 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 CHRDL2Q6WN34 429 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 C17orf64Q86WR6 236 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 ASB12Q8WXK4 309 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 UBE2E3Q969T4 207 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 SH3KBP1Q96B97 665 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 BIRC7Q96CA5 298 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 SPATA7Q9P0W8 599 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 INVSQ9Y283 1065 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 POM121BA6NF01 834 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 RFXANKO14593 260 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 HOXB9P17482 250 aaPredicted RBP18.42■□□□□ 0.54
BRF1-215ENST00000549655 GGT1P19440 569 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 PTPN6P29350 595 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 TIA1P31483 386 aaKnown RBP eCLIP18.42■□□□□ 0.54
BRF1-215ENST00000549655 EOGTQ5NDL2 527 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 TMIGD1Q6UXZ0 262 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 FAM129CQ86XR2 697 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 GALNT4Q8N4A0 578 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 SMPDL3AQ92484 453 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 NELL1Q92832 810 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 AURKBQ96GD4 344 aaPredicted RBP18.42■□□□□ 0.54
BRF1-215ENST00000549655 NSMCE2Q96MF7 247 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 CPPED1Q9BRF8 314 aaPredicted RBP18.42■□□□□ 0.54
BRF1-215ENST00000549655 OR51B5Q9H339 312 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 AP3M1Q9Y2T2 418 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
BRF1-215ENST00000549655 GNG14A0A1W2PPG7 69 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PCDH7O60245 1069 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 KCNJ13O60928 360 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 ASGR2P07307 311 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 C7P10643 843 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 UMPSP11172 480 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 ACSL1P33121 698 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PIK3CBP42338 1070 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 CLDN2P57739 230 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 BLMHQ13867 455 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 HKDC1Q2TB90 917 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 GALNT18Q6P9A2 607 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 GCNT7Q6ZNI0 430 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PHACTR4Q8IZ21 702 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 KRT78Q8N1N4 520 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 ZNF548Q8NEK5 533 aaPredicted RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 TRPV3Q8NET8 790 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 OR8J2Q8NGG1 315 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 STARD8Q92502 1023 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 SCARF2Q96GP6 870 aaPredicted RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 CCDC115Q96NT0 180 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 VCXQ9H320 206 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 KAT8Q9H7Z6 458 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 FGF22Q9HCT0 170 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 IMP3Q9NV31 184 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 ANAPC2Q9UJX6 822 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PRR19A6NJB7 356 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 SAP18O00422 153 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 SCAMP1O15126 338 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 SCAMP2O15127 329 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 TPST1O60507 370 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 BMP2P12643 396 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 WNT3P56703 355 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PHEXP78562 749 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 FOLH1Q04609 750 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 SFSWAPQ12872 951 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 CLCA4Q14CN2 919 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 DUOXA1Q1HG43 343 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 ANKRD26P1Q6NSI1 321 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 ARMCX6Q7L4S7 300 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 COMMD6Q7Z4G1 85 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 TNIP2Q8NFZ5 429 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 MIEF2Q96C03 454 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 NR1H4Q96RI1 486 aaPredicted RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 TBCDQ9BTW9 1192 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 PCBD2Q9H0N5 130 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 BATF3Q9NR55 127 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 CNOT11Q9UKZ1 510 aaKnown RBP18.41■□□□□ 0.54
BRF1-215ENST00000549655 TSC22D4Q9Y3Q8 395 aa18.41■□□□□ 0.54
BRF1-215ENST00000549655 A0A1W2PPV9 198 aa18.4■□□□□ 0.54
BRF1-215ENST00000549655 TCRBV21S2A2A0A5A6 115 aa18.4■□□□□ 0.54
BRF1-215ENST00000549655 SHISA7A6NL88 538 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms