RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-210	ENST00000549472	STARD8	Q92502	1023 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	STMN2	Q93045	179 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	TESC	Q96BS2	214 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	LRRC58	Q96CX6	371 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	KLHDC7B	Q96G42	594 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	GSDMC	Q9BYG8	508 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	RHBG	Q9H310	441 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	DMRT3	Q9NQL9	472 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	AASDHPPT	Q9NRN7	309 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	OR6C2	Q9NZP2	312 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	TMEM181	Q9P2C4	612 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	SUCO	Q9UBS9	1254 aa	Known RBP	11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	ICK	Q9UPZ9	632 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	DLGAP4	Q9Y2H0	992 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	PCDHB11	Q9Y5F2	797 aa		11.44	□□□□□ -0.58
ERBB3-210	ENST00000549472	BDP1	A6H8Y1	2624 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	OR5K4	A6NMS3	321 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472		C9JVG2	144 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	PRICKLE3	O43900	615 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	FKBP6	O75344	327 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	CCNDBP1	O95273	360 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	PRPS1L1	P21108	318 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	HRH2	P25021	359 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	AK4	P27144	223 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	GSTM2	P28161	218 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	AVPR2	P30518	371 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	ASMT	P46597	345 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	FNTB	P49356	437 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	HNRNPF	P52597	415 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	NUBP1	P53384	320 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	RPS13	P62277	151 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	REEP5	Q00765	189 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	EIF2B5	Q13144	721 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	DDX39B	Q13838	428 aa	Known RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	NFYC	Q13952	458 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	FZD2	Q14332	565 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	TIGD2	Q4W5G0	525 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	AAGAB	Q6PD74	315 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	TSSK4	Q6SA08	328 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	MSANTD1	Q6ZTZ1	278 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	PARG	Q86W56	976 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	RIMKLA	Q8IXN7	391 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	PHACTR4	Q8IZ21	702 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	TMEM105	Q8N8V8	129 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	LMNTD1	Q8N9Z9	388 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	MFSD2A	Q8NA29	543 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	VPS33A	Q96AX1	596 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	CXorf40B	Q96DE9	158 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	APOLD1	Q96LR9	279 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	TMEM74	Q96NL1	305 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	TWSG1	Q9GZX9	223 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	ADA2	Q9NZK5	511 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	CD300A	Q9UGN4	299 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	INVS	Q9Y283	1065 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	CEP192	Q8TEP8	1941 aa		11.43	□□□□□ -0.58
ERBB3-210	ENST00000549472	KIR2DS5	A0A0G2JLQ3	304 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472		A0A0G2JNG1	304 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	KIR2DS3	K7RE56	304 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SEMA3D	O95025	777 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	PSMG1	O95456	288 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	PGR	P06401	933 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	GNS	P15586	552 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	XRCC1	P18887	633 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SLC6A2	P23975	617 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	PTX3	P26022	381 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SLC19A1	P41440	591 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	TRAP1	Q12931	704 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	KIR2DS5	Q14953	304 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	FAM174B	Q3ZCQ3	159 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	PAGE3	Q5JUK9	113 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	IYD	Q6PHW0	289 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SLC30A9	Q6PML9	568 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	LAYN	Q6UX15	382 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	AMIGO1	Q86WK6	493 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SYT12	Q8IV01	421 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	RNF175	Q8N4F7	328 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	FAM160A2	Q8N612	972 aa	Predicted RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	FRMD1	Q8N878	549 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	TTL	Q8NG68	377 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	CCL4L1	Q8NHW4	92 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SLC13A3	Q8WWT9	602 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	GAB3	Q8WWW8	586 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SLC22A18	Q96BI1	424 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	CCDC124	Q96CT7	223 aa	Known RBP	11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	ASB9	Q96DX5	294 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SARG	Q9BW04	601 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	ACAT2	Q9BWD1	397 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	MIR1-1HG	Q9H1L0	117 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	SPNS1	Q9H2V7	528 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	POT1	Q9NUX5	634 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	TMEM184C	Q9NVA4	438 aa		11.42	□□□□□ -0.58
ERBB3-210	ENST00000549472	EML5	Q05BV3	1969 aa		11.41	□□□□□ -0.58
ERBB3-210	ENST00000549472		A0A1W2PR77	199 aa		11.41	□□□□□ -0.58
ERBB3-210	ENST00000549472	TRBC2	A0A5B9	178 aa		11.41	□□□□□ -0.58
ERBB3-210	ENST00000549472	FAM221B	A6H8Z2	402 aa		11.41	□□□□□ -0.58
ERBB3-210	ENST00000549472	ANKDD1B	A6NHY2	528 aa		11.41	□□□□□ -0.58
ERBB3-210	ENST00000549472	PRR33	A8MZF0	331 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms