RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TCF12Q99081 682 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 MDFIQ99750 246 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 GPAMQ9HCL2 828 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 GALPQ9UBC7 116 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 PCYOX1Q9UHG3 505 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 GNPTGQ9UJJ9 305 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 KPNA5O15131 536 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 USP1O94782 785 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 HPP00738 406 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 F7P08709 466 aaPredicted RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 OGNP20774 298 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 GRIA3P42263 894 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 CARSP49589 748 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 ADARP55265 1226 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 EIF3BP55884 814 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 GNG11P61952 73 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 DHX34Q14147 1143 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 GBX1Q14549 363 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 TMED2Q15363 201 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 RBBP7Q16576 425 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 PRMT9Q6P2P2 845 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 TTC23LQ6PF05 361 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 NCCRP1Q6ZVX7 275 aaPredicted RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 CILP2Q8IUL8 1156 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 PPIL6Q8IXY8 311 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 TTC29Q8NA56 475 aaPredicted RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 CFAP61Q8NHU2 1237 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 NRGNQ92686 78 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 PANX3Q96QZ0 392 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 SELENOSQ9BQE4 189 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 MESP1Q9BRJ9 268 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 REPIN1Q9BWE0 567 aaKnown RBP11.58□□□□□ -0.56
DDX54-206ENST00000549271 ZNF160Q9HCG1 818 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 SLC39A10Q9ULF5 831 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 CRYL1Q9Y2S2 319 aa11.58□□□□□ -0.56
DDX54-206ENST00000549271 COL6A5A8TX70 2615 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 IGLV3-12A0A075B6K2 115 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 A0A1W2PQ72 361 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 CTSVO60911 334 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 NIPSNAP2O75323 286 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 C1orf105O95561 183 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 PAMP19021 973 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 MCM3P25205 808 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 CCNFP41002 786 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 EMP3P54852 163 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 LTBQ06643 244 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 PTK6Q13882 451 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 NAA25Q14CX7 972 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 PPP1R7Q15435 360 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 WASHC2DQ5SRD0 308 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 RNF187Q5TA31 235 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 SHISA6Q6ZSJ9 500 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 RNF44Q7L0R7 432 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 SPPL2CQ8IUH8 684 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 KBTBD2Q8IY47 623 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 RAB42Q8N4Z0 105 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 C2orf73Q8N5S3 287 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 OTUD6BQ8N6M0 293 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 OR2A1Q8NGT9 310 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 THAP3Q8WTV1 239 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 PHF10Q8WUB8 498 aaKnown RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 NINJ1Q92982 152 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 ZNF669Q96BR6 464 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 MAGED4Q96JG8 741 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 CAPZA3Q96KX2 299 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 SOX17Q9H6I2 414 aaPredicted RBP11.57□□□□□ -0.56
DDX54-206ENST00000549271 SPATA7Q9P0W8 599 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 SAMD15Q9P1V8 674 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 CTSFQ9UBX1 484 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 CIDEBQ9UHD4 219 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 NFS1Q9Y697 457 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 FAM169AQ9Y6X4 670 aa11.57□□□□□ -0.56
DDX54-206ENST00000549271 FN1P02751 2386 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 A0A1W2PPV9 198 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 HYKKA2RU49 373 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 PRAMEF2O60811 474 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 BANF1O75531 89 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 F10P00742 488 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 ESR1P03372 595 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 PRR35P0CG20 571 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 PKMP14618 531 aaKnown RBP11.56□□□□□ -0.56
DDX54-206ENST00000549271 OR1D4P47884 311 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 PMP22Q01453 160 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 CTBP1Q13363 440 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 CCSMST1Q4G0I0 132 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 MSS51Q4VC12 460 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 ATG9BQ674R7 924 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 ZNF549Q6P9A3 640 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 OTOAQ7RTW8 1153 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 TAX1BP1Q86VP1 789 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 IGDCC3Q8IVU1 814 aa11.56□□□□□ -0.56
DDX54-206ENST00000549271 DENND6AQ8IWF6 608 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms