RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GFRA1P56159 465 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RPS24P62847 133 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CYP4F8P98187 520 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ALDH6A1Q02252 535 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FZD2Q14332 565 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 USP10Q14694 798 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CHI3L2Q15782 390 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.663e-7■■■□□ 18.5
SCAF11-212ENST00000549162 TMEM205Q6UW68 189 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 QSOX2Q6ZRP7 698 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TRIM67Q6ZTA4 783 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 OR4D9Q8NGE8 314 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ASZ1Q8WWH4 475 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 IPCEF1Q8WWN9 437 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TP53INP1Q96A56 240 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ARL8AQ96BM9 186 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 BARD1Q99728 777 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RACGAP1Q9H0H5 632 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FAM83DQ9H4H8 585 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RAD21L1Q9H4I0 556 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FKBP14Q9NWM8 211 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PIPSLA2A3N6 862 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 B9A039 149 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 H7C0C1 242 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 UBOX5O94941 541 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LMNAP02545 664 aaKnown RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ARSAP15289 507 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 GALP22466 123 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CALB2P22676 271 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TNFSF4P23510 183 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CCR7P32248 378 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 USP8P40818 1118 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ATP5OP48047 213 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RHOAP61586 193 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KRT71Q3SY84 523 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TAF1BQ53T94 588 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RNF220Q5VTB9 566 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SAXO2Q658L1 398 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LRRC66Q68CR7 880 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 FOXL2NBQ6ZUU3 175 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 GLT6D1Q7Z4J2 308 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LRRTM4Q86VH4 590 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ADGRF3Q8IZF5 1079 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LINC00471Q8N535 108 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 OR7D4Q8NG98 312 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 OR4C6Q8NH72 309 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ROBO4Q8WZ75 1007 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TANKQ92844 425 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SLC7A6OSQ96CW6 309 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PPP3R2Q96LZ3 170 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MS4A8Q9BY19 250 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ATXN3LQ9H3M9 355 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ACTL8Q9H568 366 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SERHLQ9NQF3 203 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 HCFC1R1Q9NWW0 138 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KLHL8Q9P2G9 620 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 IFT80Q9P2H3 777 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PCDHGB1Q9Y5G3 927 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PRAMEF27A3QJZ7 478 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LRRC72A6NJI9 287 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 FAM227AF5H4B4 570 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CCL16O15467 120 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LEFTY1O75610 366 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 UNC5CO95185 931 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KCNK5O95279 499 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ZSCAN5DPP0CG00 497 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RALBP11234 206 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PEBP1P30086 187 aaKnown RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RAD52P43351 418 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 BLKP51451 505 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MVDP53602 400 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 WNT3P56703 355 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 FADDQ13158 208 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RTP5Q14D33 572 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PDK3Q15120 406 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KIAA1614Q5VZ46 1190 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RPUSD3Q6P087 351 aaKnown RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 IYDQ6PHW0 289 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 BHLHB9Q6PI77 547 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PGAM4Q8N0Y7 254 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SUMF1Q8NBK3 374 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 OR9A1PQ8NGU1 263 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 GDPD5Q8WTR4 605 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SLC45A3Q96JT2 553 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SIAEQ9HAT2 523 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 FZD3Q9NPG1 666 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 LHX9Q9NQ69 397 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PRG3Q9Y2Y8 225 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SHOXO15266 292 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RAD51BO15315 384 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PI15O43692 258 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TMCC2O75069 709 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TIPRLO75663 272 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 EGFP01133 1207 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 IL6P05231 212 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 THBS1P07996 1170 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CTPS1P17812 591 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms