RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 EIF3FO00303 357 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 PRR35P0CG20 571 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 EMP2P54851 167 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 SYT16Q17RD7 645 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 UBE2R2Q712K3 238 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 VN1R4Q7Z5H5 301 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 CALML6Q8TD86 181 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 BRIX1Q8TDN6 353 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 LMF1Q96S06 567 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 SLX1AQ9BQ83 275 aa16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 AARSD1Q9BTE6 412 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-205ENST00000548650 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 TXNDC9O14530 226 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 ZBTB14O43829 449 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 HAUS5O94927 633 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 STATHP02808 62 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 SERPINA7P05543 415 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 CELA2AP08217 269 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 ANXA5P08758 320 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 FDXRP22570 491 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 CXCR2P25025 360 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 FNTAP49354 379 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 MAT1AQ00266 395 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 FAM53BQ14153 422 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 CRYMQ14894 314 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 PCOLCEQ15113 449 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 HSP90AA5PQ58FG0 334 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 RNASEH2BQ5TBB1 312 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 THEMIS2Q5TEJ8 643 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 FAAH2Q6GMR7 532 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 PPIL6Q8IXY8 311 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 CATSPER1Q8NEC5 780 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 FAR1Q8WVX9 515 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 NDNQ99608 321 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 EBNA1BP2Q99848 306 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 YIPF2Q9BWQ6 316 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 CCDC177Q9NQR7 707 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 RIC8BQ9NVN3 520 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 PTGFRNQ9P2B2 879 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 ADAMTS6Q9UKP5 1117 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 SH2B3Q9UQQ2 575 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 SCN2AQ99250 2005 aa16.5■□□□□ 0.23
CHMP1A-205ENST00000548650 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 H7BY64 318 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 PCDH17O14917 1159 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 NRDCO43847 1150 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 HEXBP07686 556 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 EDN3P14138 238 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 PGAM1P18669 254 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 LRRC8EQ6NSJ5 796 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 RPUSD3Q6P087 351 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 TMEM205Q6UW68 189 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 MBOAT1Q6ZNC8 495 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 PRSS41Q7RTY9 318 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 SHISA5Q8N114 240 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 C2CD4AQ8NCU7 369 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 GRK7Q8WTQ7 553 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 PRAP1Q96NZ9 151 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 OSBPL9Q96SU4 736 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 IARS2Q9NSE4 1012 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 SCN3AQ9NY46 2000 aa16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-205ENST00000548650 CACNA1DQ01668 2161 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 BMP10O95393 424 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 COL8A1P27658 744 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 TNFSF10P50591 281 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 ARG2P78540 354 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 SP140Q13342 867 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 FAM180AQ6UWF9 173 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 RIPOR1Q6ZS17 1223 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 OR9A4Q8NGU2 314 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 ZNF700Q9H0M5 742 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 TMEM184CQ9NVA4 438 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 MKL2Q9ULH7 1088 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 PDE10AQ9Y233 779 aa16.48■□□□□ 0.23
CHMP1A-205ENST00000548650 KCNE1BA0A087WTH5 132 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 GOLGA6L10A0A0M3HER8 536 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 H0YIG0 161 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 BANF1O75531 89 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 JRKO75564 520 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 NSA2O95478 260 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 HRH2P25021 359 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 GABRB3P28472 473 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 DCTP40126 519 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 AVPR1BP47901 424 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 RPS15AP62244 130 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 CSNK1G2P78368 415 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 PTK6Q13882 451 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 NDUFA9Q16795 377 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 PHKG1Q16816 387 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 RBM20Q5T481 1227 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 ZNF324BQ6AW86 544 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 ZNF787Q6DD87 383 aa16.47■□□□□ 0.23
CHMP1A-205ENST00000548650 TMEM214Q6NUQ4 689 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms