RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 HNF1BP35680 557 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 TUFMP49411 452 aaKnown RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 LIMK1P53667 647 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 BCL2L1Q07817 233 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 ZXDCQ2QGD7 858 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 CCSAPQ6IQ19 270 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 TPGS1Q6ZTW0 290 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 UBE2R2Q712K3 238 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 GALNT10Q86SR1 603 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 DCAF4L2Q8NA75 395 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 PROX1Q92786 737 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 HIST1H2AHQ96KK5 128 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 HIST1H2AJQ99878 128 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 CDADC1Q9BWV3 514 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 C6orf62Q9GZU0 229 aaPredicted RBP9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 CHST8Q9H2A9 424 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 ADPRHL2Q9NX46 363 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 ZDHHC3Q9NYG2 299 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 SPASTQ9UBP0 616 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 KLHL3Q9UH77 587 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 CORO2BQ9UQ03 480 aa9.56□□□□□ -0.88
SMARCD1-205ENST00000548573 HAT1O14929 419 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SUV39H1O43463 412 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ASNA1O43681 348 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DYRK3O43781 588 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TBL1XO60907 577 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 NBNO60934 754 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SOCS5O75159 536 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MED26O95402 600 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 COX7A2P14406 83 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PPIBP23284 216 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PTX3P26022 381 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ETV6P41212 452 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC19A1P41440 591 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MAPK8P45983 427 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CSNK1DP48730 415 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 OLR1P78380 273 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MBTPS1Q14703 1052 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 EIF4HQ15056 248 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PTCHD3Q3KNS1 767 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TOR1AIP1Q5JTV8 583 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TRAF7Q6Q0C0 670 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 FAM124AQ86V42 546 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC22A15Q8IZD6 547 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PARP16Q8N5Y8 322 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ZNF675Q8TD23 568 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 GGHQ92820 318 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ALG14Q96F25 216 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 METTL2AQ96IZ6 378 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TPD52L3Q96J77 140 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 COL21A1Q96P44 957 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DPH2Q9BQC3 489 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TM6SF2Q9BZW4 377 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 HOXD1Q9GZZ0 328 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TPT1P8Q9HAU6 139 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TRPM5Q9NZQ8 1165 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 POU2F3Q9UKI9 436 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PCDHGA3Q9Y5H0 932 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 PEX16Q9Y5Y5 336 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ADAMDEC1O15204 470 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SLC16A5O15375 505 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 UGDHO60701 494 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CELF2O95319 508 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CPSF4O95639 269 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 LATS1O95835 1130 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DLGAP3O95886 979 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 VIPP01282 170 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ABCB1P08183 1280 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 MPC1LP0DKB6 136 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 IRF1P10914 325 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DBTP11182 482 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 JUPP14923 745 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CST5P28325 142 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RRM2P31350 389 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CCR7P32248 378 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CSKP41240 450 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SEPHS1P49903 392 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CRYBA2P53672 197 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 SP140Q13342 867 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 TEAD4Q15561 434 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 HKDC1Q2TB90 917 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 LRIT3Q3SXY7 679 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RETSATQ6NUM9 610 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DENND6BQ8NEG7 585 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 FBXO22Q8NEZ5 403 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 ASB11Q8WXH4 323 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 WBP2Q969T9 261 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 CRELD1Q96HD1 420 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 KCNC2Q96PR1 638 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 LYSMD1Q96S90 227 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 DOHHQ9BU89 302 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 EBPLQ9BY08 206 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RNF38Q9H0F5 515 aa9.55□□□□□ -0.88
SMARCD1-205ENST00000548573 RUBCNLQ9H714 662 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms