RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TMEM35AQ53FP2 167 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CATSPEREQ5SY80 951 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 IRAK1BP1Q5VVH5 260 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ICE2Q659A1 982 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 Q6ZS52 159 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 IKBIPQ70UQ0 350 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 RETREG3Q86VR2 466 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 AMIGO1Q86WK6 493 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 FAM129CQ86XR2 697 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 TMEM132CQ8N3T6 1108 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 MFSD2AQ8NA29 543 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 SRFBP1Q8NEF9 429 aaKnown RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 GPBAR1Q8TDU6 330 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CLDN23Q96B33 292 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 BIRC7Q96CA5 298 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 APIPQ96GX9 242 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 TEX37Q96LM6 180 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 KCNH6Q9H252 994 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 C6orf106Q9H6K1 298 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 DMRT3Q9NQL9 472 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 PRDM8Q9NQV8 689 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 FAM120CQ9NX05 1096 aaKnown RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 ENTPD2Q9Y5L3 495 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 CFAP20Q9Y6A4 193 aaKnown RBP12.94□□□□□ -0.34
PTCH1-215ENST00000547672 PCM1Q15154 2024 aa12.94□□□□□ -0.34
PTCH1-215ENST00000547672 A0A096LPI6 279 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 GNG14A0A1W2PPG7 69 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TRBC2A0A5B9 178 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ARHGAP10A1A4S6 786 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 AQP12BA6NM10 295 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 METTL12A8MUP2 240 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 CLEC3AO75596 197 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 THEGLP0DJG4 465 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ANPEPP15144 967 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SDC1P18827 310 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 XRCC1P18887 633 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 PPIBP23284 216 aaKnown RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SLC6A2P23975 617 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 IL12AP29459 219 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TIA1P31483 386 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 VHLP40337 213 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ZFP36L2P47974 494 aaKnown RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 RPS13P62277 151 aaKnown RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ZP2Q05996 745 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TGM3Q08188 693 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 PTGR1Q14914 329 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 KIR2DS3Q14952 304 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ALG11Q2TAA5 492 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 AQP12AQ8IXF9 295 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 RIMKLAQ8IXN7 391 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SLC15A3Q8IY34 581 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SIX5Q8N196 739 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 METTL4Q8N3J2 472 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 CATSPER1Q8NEC5 780 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TRPV3Q8NET8 790 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 OR8J2Q8NGG1 315 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SNX19Q92543 992 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TSACCQ96A04 125 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 IL17FQ96PD4 163 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 GBP5Q96PP8 586 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 CGREF1Q99674 301 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 KCTD14Q9BQ13 255 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 MENTQ9BUN1 341 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 SRMSQ9H3Y6 488 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ACTL8Q9H568 366 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 IL1RL2Q9HB29 575 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
PTCH1-215ENST00000547672 AASDHPPTQ9NRN7 309 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 POT1Q9NUX5 634 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 TBC1D29Q9UFV1 150 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 CIDEBQ9UHD4 219 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 MCM8Q9UJA3 840 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 ADAM29Q9UKF5 820 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 PCDHGB4Q9UN71 923 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 CORO2BQ9UQ03 480 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 MAN2B2Q9Y2E5 1009 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 PCDHA9Q9Y5H5 950 aa12.93□□□□□ -0.34
PTCH1-215ENST00000547672 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
PTCH1-215ENST00000547672 IGHV1OR15-9A0A0B4J2B8 117 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 KRBA1A5PL33 1030 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 KRT87PA6NCN2 255 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 EVPLLA8MZ36 301 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 H0Y3Z8 333 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 ACOT8O14734 319 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 MAP3K7O43318 606 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 PCDH7O60245 1069 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 KRT36O76013 467 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 ANP32DO95626 131 aa12.92□□□□□ -0.34
PTCH1-215ENST00000547672 BAG2O95816 211 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms