RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ARF3P61204 181 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 MEF2AQ02078 507 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 ATG9BQ674R7 924 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 TLDC1Q6P9B6 456 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 TIPARPQ7Z3E1 657 aaKnown RBP19.58■□□□□ 0.73
HMGA2-211ENST00000545998 CROCCP2Q86T23 111 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 BANPQ8N9N5 519 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 SLC38A9Q8NBW4 561 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 ZNF248Q8NDW4 579 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 SPNS1Q9H2V7 528 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 AP1M2Q9Y6Q5 423 aa19.58■□□□□ 0.73
HMGA2-211ENST00000545998 USP24Q9UPU5 2620 aa19.58■□□□□ 0.72
HMGA2-211ENST00000545998 TEX51A0A1B0GUA7 166 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 FITM1A5D6W6 292 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 A8MT66 165 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 E2F3O00716 465 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 LCMT2O60294 686 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PRAMEF4O60810 478 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CPNE3O75131 537 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PROCP04070 461 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 LIPCP11150 499 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 TAC1P20366 129 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 GRK3P35626 688 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 BCL6P41182 706 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 GCGRP47871 477 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 NFKB2Q00653 900 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 REEP5Q00765 189 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 MAP7Q14244 749 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CASP8Q14790 479 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 TNFAIP8L3Q5GJ75 292 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 WASHC2DQ5SRD0 308 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PRAMEF9Q5VWM5 478 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 TEX9Q8N6V9 391 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF655Q8N720 491 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 ZNF740Q8NDX6 193 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 THAP11Q96EK4 314 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 APOPT1Q96IL0 206 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CNTNAP3BQ96NU0 1288 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CNTNAP3Q9BZ76 1288 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 EHD1Q9H4M9 534 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 ACTR5Q9H9F9 607 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 STARD5Q9NSY2 213 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 ARGLU1Q9NWB6 273 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 IRAK4Q9NWZ3 460 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 TRBC2A0A5B9 178 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CLGNO14967 610 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 DLX3O60479 287 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PLIN3O60664 434 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 C1GALT1C1LP0DN25 315 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 VARSP26640 1264 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 EEF1DP29692 281 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 EIF2S3P41091 472 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PCDH1Q08174 1060 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CLN3Q13286 438 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 CCDC153Q494R4 210 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 GALNT6Q8NCL4 622 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 RERGQ96A58 199 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 ZBTB9Q96C00 473 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 WDR34Q96EX3 536 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PGM2Q96G03 612 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 C12orf65Q9H3J6 166 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 GEMIN8Q9NWZ8 242 aaKnown RBP19.57■□□□□ 0.72
HMGA2-211ENST00000545998 SENP1Q9P0U3 644 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 RAXQ9Y2V3 346 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 PCDHGA4Q9Y5G9 962 aa19.57■□□□□ 0.72
HMGA2-211ENST00000545998 LOC400499M0QZD8 3231 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 RAD1O60671 282 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 EIF2S1P05198 315 aaKnown RBP19.56■□□□□ 0.72
HMGA2-211ENST00000545998 EPB42P16452 691 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 ATP5F1P24539 256 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-211ENST00000545998 RORAP35398 523 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 E2F2Q14209 437 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 TGIF1Q15583 401 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 PRTGQ2VWP7 1150 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 C6orf15Q6UXA7 325 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-211ENST00000545998 VN1R4Q7Z5H5 301 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 NLGN4XQ8N0W4 816 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 MFSD9Q8NBP5 474 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 NLGN4YQ8NFZ3 816 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-211ENST00000545998 NKD1Q969G9 470 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 NAF1Q96HR8 494 aaKnown RBP19.56■□□□□ 0.72
HMGA2-211ENST00000545998 LRFN5Q96NI6 719 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 SMC6Q96SB8 1091 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 AIF1LQ9BQI0 150 aa19.56■□□□□ 0.72
HMGA2-211ENST00000545998 EPG5Q9HCE0 2579 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 G3V2L1 256 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 HBQ1P09105 142 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 CREB1P16220 341 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 CASP2P42575 452 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 SCTRP47872 440 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 GTF2H2Q13888 395 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 GRM7Q14831 915 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 TBCCQ15814 346 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 HKDC1Q2TB90 917 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 XKR6Q5GH73 641 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 RHBDD2Q6NTF9 364 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 GTF2H2CQ6P1K8 395 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 GOLGA7Q7Z5G4 137 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 CSNK1A1LQ8N752 337 aa19.55■□□□□ 0.72
HMGA2-211ENST00000545998 KCNE4Q8WWG9 221 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms