RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 VSTM2BA6NLU5 285 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 SOCS6O14544 535 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 P2RX6O15547 441 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 VPS4BO75351 444 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 SERPIND1P05546 499 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 HEXBP07686 556 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 CDH1P12830 882 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 CCND1P24385 295 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 CXCR2P25025 360 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 SSTR1P30872 391 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 AVPR1BP47901 424 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 EMP3P54852 163 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 PLTPP55058 493 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 RELAQ04206 551 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 ZNF460Q14592 562 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 SYT16Q17RD7 645 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 MFSD4BQ5TF39 518 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 KIRREL2Q6UWL6 708 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 ZC3HC1Q86WB0 502 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 NKAPQ8N5F7 415 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 RBMXL3Q8N7X1 1067 aaKnown RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 ATL1Q8WXF7 558 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 TM9SF4Q92544 642 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 CDKL2Q92772 493 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 NACC2Q96BF6 587 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 C8orf44Q96CB5 159 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 VPS39Q96JC1 886 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
CIT-214ENST00000544588 NSMCE4AQ9NXX6 385 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 MOCS1Q9NZB8 636 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 WHRNQ9P202 907 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 VPS4AQ9UN37 437 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 HS3ST3B1Q9Y662 390 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 PIKFYVEQ9Y2I7 2098 aa12.52□□□□□ -0.41
CIT-214ENST00000544588 E7ESA3 106 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 MAP2K7O14733 419 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 TP73O15350 636 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 TSPAN12O95859 305 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 UQCRHP07919 91 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 ACPPP15309 386 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 CCR8P51685 355 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 AP1S2P56377 157 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 TAS2R39P59534 338 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 MEF2AQ02078 507 aaPredicted RBP12.51□□□□□ -0.41
CIT-214ENST00000544588 DSG2Q14126 1118 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 FRG1Q14331 258 aaKnown RBP12.51□□□□□ -0.41
CIT-214ENST00000544588 LCTLQ6UWM7 567 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 FRA10AC1Q70Z53 315 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 ASPGQ86U10 573 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 HPS6Q86YV9 775 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 CAMKVQ8NCB2 501 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 ZCCHC10Q8TBK6 192 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 SLC13A3Q8WWT9 602 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 THAP11Q96EK4 314 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 THOC3Q96J01 351 aaKnown RBP12.51□□□□□ -0.41
CIT-214ENST00000544588 EGFL8Q99944 293 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 ZNF160Q9HCG1 818 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 ENAMQ9NRM1 1142 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 C5AR2Q9P296 337 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 SH2B3Q9UQQ2 575 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 DYRK1BQ9Y463 629 aa12.51□□□□□ -0.41
CIT-214ENST00000544588 NPEPPSL1A6NEC2 478 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 CDC7O00311 574 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
CIT-214ENST00000544588 FOXS1O43638 330 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 OR1F1O43749 312 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 LCMT2O60294 686 aaKnown RBP12.5□□□□□ -0.41
CIT-214ENST00000544588 ENO2P09104 434 aaPredicted RBP12.5□□□□□ -0.41
CIT-214ENST00000544588 NPPBP16860 134 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 BCL6P41182 706 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 EEF1A2Q05639 463 aaKnown RBP12.5□□□□□ -0.41
CIT-214ENST00000544588 FAM53BQ14153 422 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 CSHL1Q14406 222 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 USP10Q14694 798 aaKnown RBP12.5□□□□□ -0.41
CIT-214ENST00000544588 INPP5JQ15735 1006 aaPredicted RBP12.5□□□□□ -0.41
CIT-214ENST00000544588 AGAP7PQ5VUJ5 663 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 SLC6A19Q695T7 634 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 TBC1D19Q8N5T2 526 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 OR11G2Q8NGC1 345 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 OR9A4Q8NGU2 314 aa12.5□□□□□ -0.41
CIT-214ENST00000544588 OR56A3Q8NH54 315 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms